DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RSDVYSD
Uniprot ID:
O43914
Source protein:
TYRO protein tyrosine kinase-binding protein
Source gene:
TYROBP
Class:
LIG_APCC_ABBAyCdc20_2
Location:
98:104
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9646
ASA_SCORE:
81.2714
COIL:
0.6604
CONS_SCORE:
0.8184
DSS_SCORE:
0.5884
HELIX:
0.3136
FCONS_SCORE:
1.0593
RIG_SCORE:
0.7364
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P110S
TCGA-AP-A059
UCEC
TCGA
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.1667
p.L105F
TCGA-BF-A1PX
SKCM
TCGA
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.3056
p.Q95H
TCGA-HE-7130
KIRP
TCGA
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.25
p.T92I
DO222703
COCA
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.1667
p.D93N
DO222884
COCA
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.1944
p.R114H
DO13863
GBM
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.0556
p.T100N
DO228985
LICA
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.7055
p.T89K
DO229022
LICA
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.5278
p.P101Q
DO229038
LICA
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.7035
p.H94Y
DO52365
LUSC
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.2222
p.H103P
DO220903
MELA
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.7694
p.K112E
DO37474
SKCM
ICGC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.5556
p.D104N
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
RSDVYSD
LIG_APCC_ABBAyCdc20_2
0.6932
Drug responses associated with TYROBP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RSDVYSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43914
TYRO protein tyrosine kinase-binding protein
LIG_APCC_ABBAyCdc20_2
98:104
RSDVYSD
APC,CDC20,FZR1
0.9646
More...