DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RSHVHED
Uniprot ID:
Q70EK8
Source protein:
Inactive ubiquitin carboxyl-terminal hydrolase 53
Source gene:
USP53
Class:
LIG_APCC_ABBAyCdc20_2
Location:
783:789
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7493
ASA_SCORE:
101.6429
COIL:
0.6963
CONS_SCORE:
0.4249
DSS_SCORE:
0.5028
HELIX:
0.2297
FCONS_SCORE:
0.9879
RIG_SCORE:
0.6941
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E788K
TCGA-AR-A2LE
BRCA
TCGA
RSHVHED
LIG_APCC_ABBAyCdc20_2
0.591
p.E788K
TCGA-N8-A4PI
UCS
TCGA
RSHVHED
LIG_APCC_ABBAyCdc20_2
0.591
p.E788K
DO1932
BRCA
ICGC
RSHVHED
LIG_APCC_ABBAyCdc20_2
0.591
p.H779Y
DO222632
MELA
ICGC
RSHVHED
LIG_APCC_ABBAyCdc20_2
0.2222
p.G791A
ACH-000829
Myeloma
CCLE
RSHVHED
LIG_APCC_ABBAyCdc20_2
0.2778
Drug responses associated with USP53 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RSHVHED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q70EK8
Inactive ubiquitin carboxyl-terminal hydrolase 53
LIG_APCC_ABBAyCdc20_2
783:789
RSHVHED
APC,CDC20,FZR1
0.7493
More...