DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RSKLYDE
Uniprot ID:
Q9HCK8
Source protein:
Chromodomain-helicase-DNA-binding protein 8
Source gene:
CHD8
Class:
LIG_APCC_ABBAyCdc20_2
Location:
2111:2117
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7445
ASA_SCORE:
110.6286
COIL:
0.5309
CONS_SCORE:
0.3126
DSS_SCORE:
0.5558
HELIX:
0.4453
FCONS_SCORE:
0.9253
RIG_SCORE:
0.7138
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M2125V
TCGA-5M-AAT6
COAD
TCGA
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.1111
p.L2114F
TCGA-AX-A1CE
UCEC
TCGA
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.6981
p.L2114F
SIDM01134
Small Cell Lung Carcinoma
GDSC
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.6981
p.L2114F
SIDM01986
Non-Small Cell Lung Carcinoma
GDSC
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.6981
p.E2117K
TCGA-W3-AA1V
SKCM
TCGA
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.7022
p.P2104L
DO10373
COAD
ICGC
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.1389
p.K2115R
DO228418
MALY
ICGC
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.7237
p.H2117N
DO228584
MALY
ICGC
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.7423
p.L2127F
DO46988
RECA
ICGC
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.0556
p.R2111C
SIDM02035
Colorectal Carcinoma
GDSC
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R2125Q
NCI-H2347
lung
COSMIC
RSKLYDE
LIG_APCC_ABBAyCdc20_2
0.1111
Drug responses associated with CHD8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RSKLYDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCK8
Chromodomain-helicase-DNA-binding protein 8
LIG_APCC_ABBAyCdc20_2
2111:2117
RSKLYDE
APC,CDC20,FZR1
0.7445
More...