DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RSNLFED
Uniprot ID:
P54727
Source protein:
UV excision repair protein RAD23 homolog B
Source gene:
RAD23B
Class:
LIG_APCC_ABBAyCdc20_2
Location:
173:179
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.755
ASA_SCORE:
87.1286
COIL:
0.3927
CONS_SCORE:
0.2254
DSS_SCORE:
0.5346
HELIX:
0.5774
FCONS_SCORE:
0.6574
RIG_SCORE:
0.7137
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T181A
TCGA-69-7765
LUAD
TCGA
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.2778
p.T181A
DO23580
LUAD
ICGC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.2778
p.T186M
TCGA-AA-A010
COAD
TCGA
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.1389
p.T186M
TCGA-BR-4362
STAD
TCGA
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.1389
p.T186M
DO38336
STAD
ICGC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.1389
p.T186M
SIDM02026
Colorectal Carcinoma
GDSC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.1389
p.L176I
TCGA-EE-A20F
SKCM
TCGA
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.6063
p.L176I
DO37961
SKCM
ICGC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.6063
p.S189Y
TCGA-FW-A3R5
SKCM
TCGA
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.0556
p.S189Y
DO37406
SKCM
ICGC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.0556
p.D170G
DO233227
GACA
ICGC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.25
p.A163S
DO229035
LICA
ICGC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.0556
p.R173L
DO229035
LICA
ICGC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.8428
p.S168L
SIDM01198
Burkitt's Lymphoma
GDSC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.S168L
ACH-000567
Lymphoma
CCLE
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.S168L
ST486
haematopoietic_and_lymphoid_tissue
COSMIC
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.1944
p.T164I
ACH-000976
Bile Duct Cancer
CCLE
RSNLFED
LIG_APCC_ABBAyCdc20_2
0.5278
Drug responses associated with RAD23B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RSNLFED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P54727
UV excision repair protein RAD23 homolog B
LIG_APCC_ABBAyCdc20_2
173:179
RSNLFED
APC,CDC20,FZR1
0.755
More...