DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RSRLFSD
Uniprot ID:
Q5TKA1
Source protein:
Protein lin-9 homolog
Source gene:
LIN9
Class:
LIG_APCC_ABBAyCdc20_2
Location:
60:66
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9528
ASA_SCORE:
95.0286
COIL:
0.679
CONS_SCORE:
0.4849
DSS_SCORE:
0.5804
HELIX:
0.2714
FCONS_SCORE:
1.1694
RIG_SCORE:
0.6987
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K59N
TCGA-73-4670
LUAD
TCGA
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.3056
p.R76Q
TCGA-BR-8361
STAD
TCGA
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.5
p.R76Q
TCGA-FI-A2D5
UCEC
TCGA
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.5
p.R76Q
DO48032
STAD
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.5
p.R76Q
DO41331
UCEC
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.5
p.R76Q
SIDM02078
Pancreatic Carcinoma
GDSC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.5
p.R76Q
SIDM00193
Colorectal Carcinoma
GDSC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.5
p.R76Q
ACH-000991
Colon/Colorectal Cancer
CCLE
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.5
p.R76Q
SNU-81
large_intestine
COSMIC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.5
p.E68A
TCGA-CV-A6JE
HNSC
TCGA
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.2778
p.P70L
TCGA-Z2-A8RT
SKCM
TCGA
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.2222
p.P70L
DO51301
SKCM
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.2222
p.T56R
DO50045
BRCA
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R75C
DO234208
ESAD
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R75C
DO27453
LUSC
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R75G
DO233169
GACA
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.E52A
DO49046
HNSC
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.1111
p.T56I
DO228422
LICA
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.2222
p.R75H
DO45101
LIRI
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R75H
DO50666
ORCA
ICGC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.K75N
SIDM00482
Chronic Myelogenous Leukemia
GDSC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.K75N
ACH-002302
Leukemia
CCLE
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.K75N
RPMI-8866
haematopoietic_and_lymphoid_tissue
COSMIC
RSRLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
Drug responses associated with LIN9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RSRLFSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TKA1
Protein lin-9 homolog
LIG_APCC_ABBAyCdc20_2
60:66
RSRLFSD
APC,CDC20,FZR1
0.9528
More...