DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RSVLHAD
Uniprot ID:
Q8TEY5
Source protein:
Cyclic AMP-responsive element-binding protein 3-like protein 4
Source gene:
CREB3L4
Class:
LIG_APCC_ABBAyCdc20_2
Location:
387:393
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7036
ASA_SCORE:
88.3714
COIL:
0.6223
CONS_SCORE:
0.4646
DSS_SCORE:
0.8171
HELIX:
0.1879
FCONS_SCORE:
1.097
RIG_SCORE:
0.7393
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R387L
TCGA-AB-2885
LAML
TCGA
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.8428
p.R387L
DO21397
LAML
ICGC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.8428
p.R387L
DO229035
LICA
ICGC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.8428
p.S383R
DO228546
LICA
ICGC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.2222
p.A392T
DO35085
PACA
ICGC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.6028
p.R385C
DO232878
PEME
ICGC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R385C
SIDM00738
Non-Small Cell Lung Carcinoma
GDSC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.2778
p.P380R
SIDM00353
Other Sarcomas
GDSC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.1389
p.P380R
ACH-000505
Sarcoma
CCLE
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.1389
p.P380R
RKN
ovary
COSMIC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.1389
p.G378R
SIDM00007
Other Solid Cancers
GDSC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.0833
p.G378R
ACH-001550
Skin Cancer
CCLE
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.0833
p.G378R
MCC13
skin
COSMIC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.0833
p.R385H
SIDM00487
Colorectal Carcinoma
GDSC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R385H
ACH-000963
Colon/Colorectal Cancer
CCLE
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.2778
p.R385H
CCK-81
large_intestine
COSMIC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.2778
p.V389M
SIDM01121
Small Cell Lung Carcinoma
GDSC
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.6097
p.G384E
ACH-000737
Lung Cancer
CCLE
RSVLHAD
LIG_APCC_ABBAyCdc20_2
0.25
Drug responses associated with CREB3L4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RSVLHAD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TEY5
Cyclic AMP-responsive element-binding protein 3-like protein 4
LIG_APCC_ABBAyCdc20_2
387:393
RSVLHAD
APC,CDC20,FZR1
0.7036
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