DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RTPLHND
Uniprot ID:
Q8WWI1
Source protein:
LIM domain only protein 7
Source gene:
LMO7
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1477:1483
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9962
ASA_SCORE:
101.0571
COIL:
0.8677
CONS_SCORE:
0.3608
DSS_SCORE:
0.542
HELIX:
0.107
FCONS_SCORE:
0.9867
RIG_SCORE:
0.6917
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1469Y
SIDM01611
Endometrial Carcinoma
GDSC
RTPLHND
LIG_APCC_ABBAyCdc20_2
0.1111
p.S1478N
WM35
skin
COSMIC
RTPLHND
LIG_APCC_ABBAyCdc20_2
0.7069
p.M1490V
T98G
central_nervous_system
COSMIC
RTPLHND
LIG_APCC_ABBAyCdc20_2
0.1389
Drug responses associated with LMO7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RTPLHND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWI1
LIM domain only protein 7
LIG_APCC_ABBAyCdc20_2
1477:1483
RTPLHND
APC,CDC20,FZR1
0.9962
More...