DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RTRVFLE
Uniprot ID:
Q9Y252
Source protein:
E3 ubiquitin-protein ligase RNF6
Source gene:
RNF6
Class:
LIG_APCC_ABBAyCdc20_2
Location:
346:352
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9671
ASA_SCORE:
120.0143
COIL:
0.6893
CONS_SCORE:
0.4406
DSS_SCORE:
0.5552
HELIX:
0.2587
FCONS_SCORE:
1.0726
RIG_SCORE:
0.7729
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R346K
TCGA-85-8072
LUSC
TCGA
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.6126
p.R346K
DO27667
LUSC
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.6126
p.R360S
TCGA-AJ-A5DW
UCEC
TCGA
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R360S
DO50075
UCEC
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R359H
TCGA-AP-A1DR
UCEC
TCGA
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R359H
TCGA-CD-A4MG
STAD
TCGA
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R359H
DO48009
STAD
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R359H
DO43747
UCEC
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R359C
TCGA-D1-A17Q
UCEC
TCGA
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R359C
DO41903
UCEC
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R357Q
TCGA-D7-8579
STAD
TCGA
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1944
p.R357Q
DO47985
STAD
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.1944
p.G345C
TCGA-VQ-A8P2
STAD
TCGA
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.3056
p.G345C
DO51761
STAD
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.3056
p.T362N
DO229019
LICA
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.0556
p.Q353K
DO229035
LICA
ICGC
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.3056
p.T362A
ACH-001610
Brain Cancer
CCLE
RTRVFLE
LIG_APCC_ABBAyCdc20_2
0.0556
Drug responses associated with RNF6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RTRVFLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y252
E3 ubiquitin-protein ligase RNF6
LIG_APCC_ABBAyCdc20_2
346:352
RTRVFLE
APC,CDC20,FZR1
0.9671
More...