DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RTVLYND
Uniprot ID:
Q6RI45
Source protein:
Bromodomain and WD repeat-containing protein 3
Source gene:
BRWD3
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1755:1761
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9258
ASA_SCORE:
107.3143
COIL:
0.7661
CONS_SCORE:
0.2886
DSS_SCORE:
0.4956
HELIX:
0.0257
FCONS_SCORE:
0.9498
RIG_SCORE:
0.7699
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1752H
TCGA-49-6761
LUAD
TCGA
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.25
p.Q1752H
DO24566
LUAD
ICGC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.25
p.F1768V
TCGA-AA-3984
COAD
TCGA
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.1389
p.F1768V
DO9002
COAD
ICGC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.1389
p.R1755M
TCGA-DU-6392
LGG
TCGA
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.8632
p.R1755M
DO22237
LGG
ICGC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.8632
p.T1771A
DO227802
COCA
ICGC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.0556
p.D1766H
DO223037
ESCA
ICGC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.1944
p.R1746Q
DO233624
GACA
ICGC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1746Q
SIDM02056
Pancreatic Carcinoma
GDSC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.0833
p.V1769M
SIDM01090
Colorectal Carcinoma
GDSC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.1111
p.V1769M
ACH-000943
Colon/Colorectal Cancer
CCLE
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.1111
p.V1769M
RKO
large_intestine
COSMIC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.1111
p.R1754W
ACH-000586
Lung Cancer
CCLE
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.3056
p.R1754W
NCI-H1876
lung
COSMIC
RTVLYND
LIG_APCC_ABBAyCdc20_2
0.3056
Drug responses associated with BRWD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RTVLYND
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6RI45
Bromodomain and WD repeat-containing protein 3
LIG_APCC_ABBAyCdc20_2
1755:1761
RTVLYND
APC,CDC20,FZR1
0.9258
More...