DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RVDLFDD
Uniprot ID:
Q6S5L8
Source protein:
SHC-transforming protein 4
Source gene:
SHC4
Class:
LIG_APCC_ABBAyCdc20_2
Location:
456:462
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5613
ASA_SCORE:
70.7571
COIL:
0.7709
CONS_SCORE:
0.4263
DSS_SCORE:
0.2003
HELIX:
0.1399
FCONS_SCORE:
1.0289
RIG_SCORE:
0.8669
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N467S
TCGA-4P-AA8J
HNSC
TCGA
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.R456Q
TCGA-AA-3510
COAD
TCGA
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.7329
p.R456Q
TCGA-B5-A3FA
UCEC
TCGA
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.7329
p.R456Q
SIDM00120
Prostate Carcinoma
GDSC
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.7329
p.R456Q
ACH-000979
Prostate Cancer
CCLE
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.7329
p.R456Q
DU-145
prostate
COSMIC
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.7329
p.L451S
TCGA-B5-A1MX
UCEC
TCGA
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.1944
p.V457A
SIDM00216
Colorectal Carcinoma
GDSC
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.5825
p.V457A
ACH-000989
Colon/Colorectal Cancer
CCLE
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.5825
p.V457A
SNU-175
large_intestine
COSMIC
RVDLFDD
LIG_APCC_ABBAyCdc20_2
0.5825
Drug responses associated with SHC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RVDLFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6S5L8
SHC-transforming protein 4
LIG_APCC_ABBAyCdc20_2
456:462
RVDLFDD
APC,CDC20,FZR1
0.5613
More...