DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RVSLHKE
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1583:1589
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5397
ASA_SCORE:
115.3143
COIL:
0.8931
CONS_SCORE:
0.3275
DSS_SCORE:
0.6939
HELIX:
0.0739
FCONS_SCORE:
0.9214
RIG_SCORE:
0.6118
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1576S
TCGA-22-4593
LUSC
TCGA
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.G1576S
DO27018
LUSC
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.G1576S
DO222504
MELA
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.G1576S
SIDM00781
Colorectal Carcinoma
GDSC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.G1576S
SIDM00780
Colorectal Carcinoma
GDSC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.G1576S
SNU-C2B
large_intestine
COSMIC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.R1583C
TCGA-2W-A8YY
CESC
TCGA
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R1583C
TCGA-EO-A22U
UCEC
TCGA
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R1583C
DO223732
CESC
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R1583C
DO232952
PEME
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R1583C
DO43755
UCEC
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.8301
p.R1581C
TCGA-BH-A0AY
BRCA
TCGA
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.2778
p.R1581C
DO5025
BRCA
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.2778
p.K1588N
TCGA-BR-8361
STAD
TCGA
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.5806
p.K1588N
DO48032
STAD
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.5806
p.D1575N
TCGA-EE-A20C
SKCM
TCGA
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1111
p.D1575N
DO222775
MELA
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1111
p.D1575N
DO47665
SKCM
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1111
p.E1597Q
TCGA-VS-A953
CESC
TCGA
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1111
p.E1597Q
DO219727
CESC
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.1111
p.R1583H
DO234286
ESAD
ICGC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.8244
p.S1594L
SIDM01199
Hepatocellular Carcinoma
GDSC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.6389
p.S1594L
ACH-000493
Liver Cancer
CCLE
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.6389
p.S1594L
SNU-423
liver
COSMIC
RVSLHKE
LIG_APCC_ABBAyCdc20_2
0.6389
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RVSLHKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
LIG_APCC_ABBAyCdc20_2
1583:1589
RVSLHKE
APC,CDC20,FZR1
0.5397
More...