DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
RVTLFSD
Uniprot ID:
Q14692
Source protein:
Ribosome biogenesis protein BMS1 homolog
Source gene:
BMS1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
391:397
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9924
ASA_SCORE:
69.8286
COIL:
0.6421
CONS_SCORE:
0.3786
DSS_SCORE:
0.4293
HELIX:
0.2184
FCONS_SCORE:
1.1378
RIG_SCORE:
0.7374
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G402W
TCGA-23-1021
OV
TCGA
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.1944
p.G402W
DO32183
OV
ICGC
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.1944
p.T393M
TCGA-AA-3864
COAD
TCGA
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.6312
p.T393M
DO8490
COAD
ICGC
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.6312
p.I406V
SIDM00783
Colorectal Carcinoma
GDSC
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.I406V
ACH-000971
Colon/Colorectal Cancer
CCLE
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.I406V
HCT-116
large_intestine
COSMIC
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.0833
p.V392L
SIDM01619
Endometrial Carcinoma
GDSC
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.5654
p.V392L
ACH-000984
Endometrial/Uterine Cancer
CCLE
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.5654
p.R391Q
ACH-001322
Sarcoma
CCLE
RVTLFSD
LIG_APCC_ABBAyCdc20_2
0.7329
Drug responses associated with BMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RVTLFSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14692
Ribosome biogenesis protein BMS1 homolog
LIG_APCC_ABBAyCdc20_2
391:397
RVTLFSD
APC,CDC20,FZR1
0.9924
More...