DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RVVVHKE
Uniprot ID:
O43491
Source protein:
Band 4.1-like protein 2
Source gene:
EPB41L2
Class:
LIG_APCC_ABBAyCdc20_2
Location:
990:996
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.988
ASA_SCORE:
79.5857
COIL:
0.1323
CONS_SCORE:
0.5663
DSS_SCORE:
0.5778
HELIX:
0.0104
FCONS_SCORE:
1.2623
RIG_SCORE:
0.7817
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E996Q
TCGA-EA-A3HU
CESC
TCGA
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.6744
p.E996Q
DO6320
CESC
ICGC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.6744
p.H994R
TCGA-G3-A5SK
LIHC
TCGA
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.8244
p.H994R
DO45005
LIHC
ICGC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.8244
p.E1002Q
TCGA-N9-A4Q7
UCS
TCGA
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.1667
p.E996A
DO222500
ESCA
ICGC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.7701
p.S987L
DO228946
LICA
ICGC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.6944
p.H983N
DO229038
LICA
ICGC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.1389
p.E998Q
DO230993
LUSC
ICGC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.2778
p.E998Q
DO230990
LUSC
ICGC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.2778
p.E981G
DO230451
UTCA
ICGC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.0833
p.E1001D
SIDM00976
Melanoma
GDSC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.1944
p.E1001D
WM1552C
skin
COSMIC
RVVVHKE
LIG_APCC_ABBAyCdc20_2
0.1944
Drug responses associated with EPB41L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RVVVHKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43491
Band 4.1-like protein 2
LIG_APCC_ABBAyCdc20_2
990:996
RVVVHKE
APC,CDC20,FZR1
0.988
More...