DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
RYELHSE
Uniprot ID:
O15230
Source protein:
Laminin subunit alpha-5
Source gene:
LAMA5
Class:
LIG_APCC_ABBAyCdc20_2
Location:
1713:1719
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7196
ASA_SCORE:
47.1
COIL:
0.1549
CONS_SCORE:
0.4428
DSS_SCORE:
0.3651
HELIX:
0.007
FCONS_SCORE:
1.0552
RIG_SCORE:
0.7702
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1704W
TCGA-3B-A9HT
SARC
TCGA
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1704W
DO219934
SARC
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1704W
SIDM00623
Other Blood Cancers
GDSC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1704W
SIDM00137
Non-Small Cell Lung Carcinoma
GDSC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.R1722W
TCGA-C5-A1M8
CESC
TCGA
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.R1722W
DO48993
CESC
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.R1722W
SIDM00668
Non-Cancerous
GDSC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.R1722W
ACH-002245
Lymphoma
CCLE
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.R1722W
Hs-445
haematopoietic_and_lymphoid_tissue
COSMIC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.G1710R
TCGA-DA-A95Y
SKCM
TCGA
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.G1710R
DO223908
SKCM
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.25
p.P1728L
TCGA-EE-A20C
SKCM
TCGA
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.P1728L
DO47665
SKCM
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.P1728S
TCGA-EE-A20C
SKCM
TCGA
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.P1728S
DO47665
SKCM
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.G1709S
DO233709
GACA
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.2222
p.P1728F
DO222775
MELA
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0833
p.L1712H
DO232842
NACA
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.3056
p.L1712P
DO233299
NACA
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.3056
p.D1703G
DO218878
SKCA
ICGC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.0556
p.L1716R
SIDM00167
Head and Neck Carcinoma
GDSC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.8428
p.L1716R
SIDM01444
Glioblastoma
GDSC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.8428
p.L1716R
SIDM00497
Colorectal Carcinoma
GDSC
RYELHSE
LIG_APCC_ABBAyCdc20_2
0.8428
Drug responses associated with LAMA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RYELHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15230
Laminin subunit alpha-5
LIG_APCC_ABBAyCdc20_2
1713:1719
RYELHSE
APC,CDC20,FZR1
0.7196
More...