DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RYKIHPD
Uniprot ID:
O95992
Source protein:
Cholesterol 25-hydroxylase
Source gene:
CH25H
Class:
LIG_APCC_ABBAyCdc20_2
Location:
70:76
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7352
ASA_SCORE:
80.3143
COIL:
0.779
CONS_SCORE:
0.64
DSS_SCORE:
0.0522
HELIX:
0.1504
FCONS_SCORE:
1.4817
RIG_SCORE:
0.8587
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A81T
TCGA-CK-5913
COAD
TCGA
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.1944
p.A81T
DO8826
COAD
ICGC
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.1944
p.S78L
TCGA-YC-A89H
BLCA
TCGA
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.2778
p.S78L
DO51948
BLCA
ICGC
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.2778
p.W64C
DO228935
COCA
ICGC
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.1667
p.H74N
DO229008
LICA
ICGC
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.7423
p.P86L
SIDM01006
Plasma Cell Myeloma
GDSC
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.0556
p.P86L
KARPAS-620
haematopoietic_and_lymphoid_tissue
COSMIC
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.0556
p.R70H
SIDM00251
Gastric Carcinoma
GDSC
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.8244
p.R70H
ACH-000949
Gastric Cancer
CCLE
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.8244
p.R70H
TGBC11TKB
stomach
COSMIC
RYKIHPD
LIG_APCC_ABBAyCdc20_2
0.8244
Drug responses associated with CH25H mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RYKIHPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95992
Cholesterol 25-hydroxylase
LIG_APCC_ABBAyCdc20_2
70:76
RYKIHPD
APC,CDC20,FZR1
0.7352
More...