DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
RYRLHFE
Uniprot ID:
P36915
Source protein:
Guanine nucleotide-binding protein-like 1
Source gene:
GNL1
Class:
LIG_APCC_ABBAyCdc20_2
Location:
80:86
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8268
ASA_SCORE:
64.9429
COIL:
0.3046
CONS_SCORE:
0.4094
DSS_SCORE:
0.5463
HELIX:
0.1099
FCONS_SCORE:
1.1072
RIG_SCORE:
0.7321
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L83V
TCGA-04-1369
OV
TCGA
RYRLHFE
LIG_APCC_ABBAyCdc20_2
0.5654
p.L83V
DO28183
OV
ICGC
RYRLHFE
LIG_APCC_ABBAyCdc20_2
0.5654
p.R90K
TCGA-50-6597
LUAD
TCGA
RYRLHFE
LIG_APCC_ABBAyCdc20_2
0.2222
p.R90K
DO26062
LUAD
ICGC
RYRLHFE
LIG_APCC_ABBAyCdc20_2
0.2222
p.Y81H
SIDM01045
Endometrial Carcinoma
GDSC
RYRLHFE
LIG_APCC_ABBAyCdc20_2
0.7229
p.Y81H
EN
endometrium
COSMIC
RYRLHFE
LIG_APCC_ABBAyCdc20_2
0.7229
Drug responses associated with GNL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of RYRLHFE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P36915
Guanine nucleotide-binding protein-like 1
LIG_APCC_ABBAyCdc20_2
80:86
RYRLHFE
APC,CDC20,FZR1
0.8268
More...