DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SALTAVVPDI
Uniprot ID:
Q12766
Source protein:
HMG domain-containing protein 3
Source gene:
HMGXB3
Class:
DEG_COP1_1
Location:
109:118
E3 ligase:
COP1
DEGRON score:
0.7075
ASA_SCORE:
79.2
COIL:
0.8665
CONS_SCORE:
0.1207
DSS_SCORE:
0.2063
HELIX:
0.0963
FCONS_SCORE:
0.8987
RIG_SCORE:
0.8096
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G101C
DO234350
ESAD
ICGC
SALTAVVPDI
DEG_COP1_1
0.1111
p.P126S
SIDM00596
Endometrial Carcinoma
GDSC
SALTAVVPDI
DEG_COP1_1
0.1111
p.P126S
ACH-001517
Endometrial/Uterine Cancer
CCLE
SALTAVVPDI
DEG_COP1_1
0.1111
p.P126S
HEC-1
endometrium
COSMIC
SALTAVVPDI
DEG_COP1_1
0.1111
p.P116Q
SIDM00220
Ovarian Carcinoma
GDSC
SALTAVVPDI
DEG_COP1_1
0.7035
p.P116Q
ACH-000962
Ovarian Cancer
CCLE
SALTAVVPDI
DEG_COP1_1
0.7035
p.P116Q
ACH-001145
Ovarian Cancer
CCLE
SALTAVVPDI
DEG_COP1_1
0.7035
p.P116Q
OC-314
ovary
COSMIC
SALTAVVPDI
DEG_COP1_1
0.7035
Drug responses associated with HMGXB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SALTAVVPDI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12766
HMG domain-containing protein 3
DEG_COP1_1
109:118
SALTAVVPDI
COP1
0.7075
More...