DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SATSSVPTV
Uniprot ID:
Q5T8P6
Source protein:
RNA-binding protein 26
Source gene:
RBM26
Class:
DEG_COP1_1
Location:
398:406
E3 ligase:
COP1
DEGRON score:
0.9922
ASA_SCORE:
65.0778
COIL:
0.9194
CONS_SCORE:
0.2475
DSS_SCORE:
0.6471
HELIX:
0.0513
FCONS_SCORE:
0.775
RIG_SCORE:
0.5963
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S390C
TCGA-53-7624
LUAD
TCGA
SATSSVPTV
DEG_COP1_1
0.1111
p.S390C
DO25058
LUAD
ICGC
SATSSVPTV
DEG_COP1_1
0.1111
p.P416S
TCGA-CQ-5326
HNSC
TCGA
SATSSVPTV
DEG_COP1_1
0.0556
p.P416S
DO15286
HNSC
ICGC
SATSSVPTV
DEG_COP1_1
0.0556
p.P396L
TCGA-GN-A26C
SKCM
TCGA
SATSSVPTV
DEG_COP1_1
0.2778
p.P396L
DO37782
SKCM
ICGC
SATSSVPTV
DEG_COP1_1
0.2778
p.P389L
TCGA-UU-A93S
BRCA
TCGA
SATSSVPTV
DEG_COP1_1
0.0833
p.P389L
DO219645
BRCA
ICGC
SATSSVPTV
DEG_COP1_1
0.0833
p.A399S
DO225249
BRCA
ICGC
SATSSVPTV
DEG_COP1_1
0.6477
p.S402Y
DO228952
LICA
ICGC
SATSSVPTV
DEG_COP1_1
0.6009
Drug responses associated with RBM26 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SATSSVPTV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T8P6
RNA-binding protein 26
DEG_COP1_1
398:406
SATSSVPTV
COP1
0.9922
More...