DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SCSCAVVPEGA
Uniprot ID:
Q8NFU1
Source protein:
Bestrophin-2
Source gene:
BEST2
Class:
DEG_COP1_1
Location:
432:442
E3 ligase:
COP1
DEGRON score:
0.7888
ASA_SCORE:
74.2364
COIL:
0.8773
CONS_SCORE:
0.4453
DSS_SCORE:
0.095
HELIX:
0.0667
FCONS_SCORE:
1.0649
RIG_SCORE:
0.7308
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E440K
TCGA-FU-A40J
CESC
TCGA
SCSCAVVPEGA
DEG_COP1_1
0.7022
p.E440K
DO44314
CESC
ICGC
SCSCAVVPEGA
DEG_COP1_1
0.7022
p.S447R
DO10324
COAD
ICGC
SCSCAVVPEGA
DEG_COP1_1
0.1944
p.C423F
DO228974
LICA
ICGC
SCSCAVVPEGA
DEG_COP1_1
0.0833
p.S432R
DO46877
RECA
ICGC
SCSCAVVPEGA
DEG_COP1_1
0.7427
p.A427V
ACH-000858
Lung Cancer
CCLE
SCSCAVVPEGA
DEG_COP1_1
0.1944
p.A443V
ACH-002005
Skin Cancer
CCLE
SCSCAVVPEGA
DEG_COP1_1
0.3056
Drug responses associated with BEST2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SCSCAVVPEGA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFU1
Bestrophin-2
DEG_COP1_1
432:442
SCSCAVVPEGA
COP1
0.7888
More...