DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SDDDLGTVPDY
Uniprot ID:
P51610
Source protein:
Host cell factor 1
Source gene:
HCFC1
Class:
DEG_COP1_1
Location:
1838:1848
E3 ligase:
COP1
DEGRON score:
0.9941
ASA_SCORE:
75.0818
COIL:
0.8592
CONS_SCORE:
0.5056
DSS_SCORE:
0.5312
HELIX:
0.0858
FCONS_SCORE:
1.0637
RIG_SCORE:
0.7654
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1831Q
TCGA-CF-A8HX
BLCA
TCGA
SDDDLGTVPDY
DEG_COP1_1
0.1389
p.L1856P
TCGA-CV-A6K1
HNSC
TCGA
SDDDLGTVPDY
DEG_COP1_1
0.1111
p.L1856P
DO52078
HNSC
ICGC
SDDDLGTVPDY
DEG_COP1_1
0.1111
p.D1833G
TCGA-KK-A7AV
PRAD
TCGA
SDDDLGTVPDY
DEG_COP1_1
0.1944
p.D1833G
DO219301
PRAD
ICGC
SDDDLGTVPDY
DEG_COP1_1
0.1944
p.E1854Q
DO51555
KIRP
ICGC
SDDDLGTVPDY
DEG_COP1_1
0.1667
p.D1839E
DO229041
LICA
ICGC
SDDDLGTVPDY
DEG_COP1_1
0.5647
p.G1843D
DO220913
MELA
ICGC
SDDDLGTVPDY
DEG_COP1_1
0.6087
p.F1829L
SIDM00651
Non-Small Cell Lung Carcinoma
GDSC
SDDDLGTVPDY
DEG_COP1_1
0.0833
p.F1829L
ACH-000980
Lung Cancer
CCLE
SDDDLGTVPDY
DEG_COP1_1
0.0833
p.F1829L
NCI-H1155
lung
COSMIC
SDDDLGTVPDY
DEG_COP1_1
0.0833
p.P1837T
SIDM00780
Colorectal Carcinoma
GDSC
SDDDLGTVPDY
DEG_COP1_1
0.3056
p.A1849T
ACH-000050
Myeloma
CCLE
SDDDLGTVPDY
DEG_COP1_1
0.3056
p.A1849T
NCI-H929
haematopoietic_and_lymphoid_tissue
COSMIC
SDDDLGTVPDY
DEG_COP1_1
0.3056
p.G1832D
ACH-000986
Colon/Colorectal Cancer
CCLE
SDDDLGTVPDY
DEG_COP1_1
0.1667
p.G1832D
HT-115
large_intestine
COSMIC
SDDDLGTVPDY
DEG_COP1_1
0.1667
p.E1834G
ACH-000988
Endometrial/Uterine Cancer
CCLE
SDDDLGTVPDY
DEG_COP1_1
0.2222
p.E1834G
MFE-319
endometrium
COSMIC
SDDDLGTVPDY
DEG_COP1_1
0.2222
p.S1835F
ACH-002309
Sarcoma
CCLE
SDDDLGTVPDY
DEG_COP1_1
0.25
p.S1835F
SW684
soft_tissue
COSMIC
SDDDLGTVPDY
DEG_COP1_1
0.25
p.P1843L
LNCaP-Clone-FGC
prostate
COSMIC
SDDDLGTVPDY
DEG_COP1_1
0.7582
Drug responses associated with HCFC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SDDDLGTVPDY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51610
Host cell factor 1
DEG_COP1_1
1838:1848
SDDDLGTVPDY
COP1
0.9941
More...