DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SDDDVPSV
Uniprot ID:
Q6PL18
Source protein:
ATPase family AAA domain-containing protein 2
Source gene:
ATAD2
Class:
DEG_COP1_1
Location:
751:758
E3 ligase:
COP1
DEGRON score:
0.9949
ASA_SCORE:
69.4125
COIL:
0.8131
CONS_SCORE:
0.1355
DSS_SCORE:
0.3914
HELIX:
0.1296
FCONS_SCORE:
0.6901
RIG_SCORE:
0.7498
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S767Y
TCGA-19-5956
GBM
TCGA
SDDDVPSV
DEG_COP1_1
0.0833
p.S767Y
DO13863
GBM
ICGC
SDDDVPSV
DEG_COP1_1
0.0833
p.P742L
TCGA-EE-A3JD
SKCM
TCGA
SDDDVPSV
DEG_COP1_1
0.0833
p.P742L
DO50299
SKCM
ICGC
SDDDVPSV
DEG_COP1_1
0.0833
p.G762R
TCGA-FD-A6TC
BLCA
TCGA
SDDDVPSV
DEG_COP1_1
0.2222
p.G762R
DO49755
BLCA
ICGC
SDDDVPSV
DEG_COP1_1
0.2222
p.C741S
TCGA-UB-AA0U
LIHC
TCGA
SDDDVPSV
DEG_COP1_1
0.0556
p.C741S
DO52323
LIHC
ICGC
SDDDVPSV
DEG_COP1_1
0.0556
p.D753G
DO234366
ESAD
ICGC
SDDDVPSV
DEG_COP1_1
0.6087
p.L744Q
DO50922
LICA
ICGC
SDDDVPSV
DEG_COP1_1
0.1389
p.S768F
DO222662
MELA
ICGC
SDDDVPSV
DEG_COP1_1
0.0556
p.D754Y
DO50657
ORCA
ICGC
SDDDVPSV
DEG_COP1_1
0.6214
Drug responses associated with ATAD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SDDDVPSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PL18
ATPase family AAA domain-containing protein 2
DEG_COP1_1
751:758
SDDDVPSV
COP1
0.9949
More...