DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SDDPVVPSL
Uniprot ID:
Q5H9U9
Source protein:
Probable ATP-dependent RNA helicase DDX60-like
Source gene:
DDX60L
Class:
DEG_COP1_1
Location:
467:475
E3 ligase:
COP1
DEGRON score:
0.5236
ASA_SCORE:
75.7889
COIL:
0.8417
CONS_SCORE:
0.2773
DSS_SCORE:
0.2934
HELIX:
0.11
FCONS_SCORE:
0.9568
RIG_SCORE:
0.7812
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V471A
TCGA-DI-A1BU
UCEC
TCGA
SDDPVVPSL
DEG_COP1_1
0.5825
p.V471A
DO42023
UCEC
ICGC
SDDPVVPSL
DEG_COP1_1
0.5825
p.P470S
TCGA-EE-A3J5
SKCM
TCGA
SDDPVVPSL
DEG_COP1_1
0.5641
p.P470S
DO47331
SKCM
ICGC
SDDPVVPSL
DEG_COP1_1
0.5641
p.P473L
TCGA-FR-A8YC
SKCM
TCGA
SDDPVVPSL
DEG_COP1_1
0.7582
p.P473L
DO50301
SKCM
ICGC
SDDPVVPSL
DEG_COP1_1
0.7582
p.P470L
DO222751
BTCA
ICGC
SDDPVVPSL
DEG_COP1_1
0.6471
p.L462S
DO50424
PRAD
ICGC
SDDPVVPSL
DEG_COP1_1
0.1944
p.D469N
SIDM00048
Non-Small Cell Lung Carcinoma
GDSC
SDDPVVPSL
DEG_COP1_1
0.5821
p.D469N
SIDM01318
Hepatocellular Carcinoma
GDSC
SDDPVVPSL
DEG_COP1_1
0.5821
p.D469N
SIDM01590
Breast Carcinoma
GDSC
SDDPVVPSL
DEG_COP1_1
0.5821
p.D469Y
SIDM00749
Non-Small Cell Lung Carcinoma
GDSC
SDDPVVPSL
DEG_COP1_1
0.6214
p.D469Y
NCI-H1573
lung
COSMIC
SDDPVVPSL
DEG_COP1_1
0.6214
Drug responses associated with DDX60L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SDDPVVPSL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5H9U9
Probable ATP-dependent RNA helicase DDX60-like
DEG_COP1_1
467:475
SDDPVVPSL
COP1
0.5236
More...