DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SDGSLVPEL
Uniprot ID:
Q9Y5F7
Source protein:
Protocadherin gamma-C4
Source gene:
PCDHGC4
Class:
DEG_COP1_1
Location:
186:194
E3 ligase:
COP1
DEGRON score:
0.8231
ASA_SCORE:
51.7444
COIL:
0.4486
CONS_SCORE:
0.7462
DSS_SCORE:
0.3156
HELIX:
0.0058
FCONS_SCORE:
1.1888
RIG_SCORE:
0.7493
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G188S
TCGA-05-4250
LUAD
TCGA
SDGSLVPEL
DEG_COP1_1
0.5882
p.G188S
TCGA-86-8055
LUAD
TCGA
SDGSLVPEL
DEG_COP1_1
0.5882
p.G188S
DO25554
LUAD
ICGC
SDGSLVPEL
DEG_COP1_1
0.5882
p.G188S
DO24457
LUAD
ICGC
SDGSLVPEL
DEG_COP1_1
0.5882
p.R185H
TCGA-2W-A8YY
CESC
TCGA
SDGSLVPEL
DEG_COP1_1
0.3056
p.R185H
DO223732
CESC
ICGC
SDGSLVPEL
DEG_COP1_1
0.3056
p.D187N
TCGA-2Z-A9J7
KIRP
TCGA
SDGSLVPEL
DEG_COP1_1
0.6932
p.D187N
DO219658
KIRP
ICGC
SDGSLVPEL
DEG_COP1_1
0.6932
p.D201N
TCGA-XK-AAIW
PRAD
TCGA
SDGSLVPEL
DEG_COP1_1
0.1389
p.D201N
DO51407
PRAD
ICGC
SDGSLVPEL
DEG_COP1_1
0.1389
p.E193A
DO233791
GACA
ICGC
SDGSLVPEL
DEG_COP1_1
0.7701
p.A179S
DO229019
LICA
ICGC
SDGSLVPEL
DEG_COP1_1
0.1389
p.K204N
DO229036
LICA
ICGC
SDGSLVPEL
DEG_COP1_1
0.1667
Drug responses associated with PCDHGC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SDGSLVPEL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5F7
Protocadherin gamma-C4
DEG_COP1_1
186:194
SDGSLVPEL
COP1
0.8231
More...