DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SEACVPSV
Uniprot ID:
Q9NSB2
Source protein:
Keratin, type II cuticular Hb4
Source gene:
KRT84
Class:
DEG_COP1_1
Location:
559:566
E3 ligase:
COP1
DEGRON score:
0.9601
ASA_SCORE:
77.4375
COIL:
0.7986
CONS_SCORE:
0.8111
DSS_SCORE:
0.2988
HELIX:
0.1241
FCONS_SCORE:
0.9928
RIG_SCORE:
0.7815
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V566I
TCGA-AD-6899
COAD
TCGA
SEACVPSV
DEG_COP1_1
0.5965
p.V566I
DO8818
COAD
ICGC
SEACVPSV
DEG_COP1_1
0.5965
p.G574R
TCGA-D8-A1XQ
BRCA
TCGA
SEACVPSV
DEG_COP1_1
0.1111
p.G574R
DO3095
BRCA
ICGC
SEACVPSV
DEG_COP1_1
0.1111
p.P569S
TCGA-EA-A3HR
CESC
TCGA
SEACVPSV
DEG_COP1_1
0.25
p.P569S
DO6326
CESC
ICGC
SEACVPSV
DEG_COP1_1
0.25
p.P569S
SIDM01024
Esophageal Squamous Cell Carcinoma
GDSC
SEACVPSV
DEG_COP1_1
0.25
p.E560K
DO220906
MELA
ICGC
SEACVPSV
DEG_COP1_1
0.7022
p.E560K
SIDM00828
Other Sarcomas
GDSC
SEACVPSV
DEG_COP1_1
0.7022
p.E560K
HT-1080
soft_tissue
COSMIC
SEACVPSV
DEG_COP1_1
0.7022
p.L557I
SIDM02017
Colorectal Carcinoma
GDSC
SEACVPSV
DEG_COP1_1
0.2778
p.V563D
SIDM00729
Non-Small Cell Lung Carcinoma
GDSC
SEACVPSV
DEG_COP1_1
0.7785
p.V563D
SIDM00044
Head and Neck Carcinoma
GDSC
SEACVPSV
DEG_COP1_1
0.7785
p.V563D
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
SEACVPSV
DEG_COP1_1
0.7785
p.G575D
SIDM00604
Oral Cavity Carcinoma
GDSC
SEACVPSV
DEG_COP1_1
0.0833
p.G575D
ACH-001542
Head and Neck Cancer
CCLE
SEACVPSV
DEG_COP1_1
0.0833
Drug responses associated with KRT84 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SEACVPSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NSB2
Keratin, type II cuticular Hb4
DEG_COP1_1
559:566
SEACVPSV
COP1
0.9601
More...