DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SEAPSYIAVPDP
Uniprot ID:
Q9UQR0
Source protein:
Sex comb on midleg-like protein 2
Source gene:
SCML2
Class:
DEG_COP1_1
Location:
606:617
E3 ligase:
COP1
DEGRON score:
0.9977
ASA_SCORE:
74.4417
COIL:
0.8069
CONS_SCORE:
0.7156
DSS_SCORE:
0.4738
HELIX:
0.0832
FCONS_SCORE:
1.0173
RIG_SCORE:
0.7217
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H596L
TCGA-49-4506
LUAD
TCGA
SEAPSYIAVPDP
DEG_COP1_1
0.0556
p.H596L
DO25084
LUAD
ICGC
SEAPSYIAVPDP
DEG_COP1_1
0.0556
p.A613T
TCGA-AJ-A3OL
UCEC
TCGA
SEAPSYIAVPDP
DEG_COP1_1
0.6028
p.A613T
DO43001
UCEC
ICGC
SEAPSYIAVPDP
DEG_COP1_1
0.6028
p.P617H
TCGA-AP-A056
UCEC
TCGA
SEAPSYIAVPDP
DEG_COP1_1
0.7694
p.P617H
DO43971
UCEC
ICGC
SEAPSYIAVPDP
DEG_COP1_1
0.7694
p.K626N
TCGA-BS-A0UV
UCEC
TCGA
SEAPSYIAVPDP
DEG_COP1_1
0.1944
p.K626N
DO42793
UCEC
ICGC
SEAPSYIAVPDP
DEG_COP1_1
0.1944
p.D627A
TCGA-EE-A2A2
SKCM
TCGA
SEAPSYIAVPDP
DEG_COP1_1
0.0556
p.D627A
DO37583
SKCM
ICGC
SEAPSYIAVPDP
DEG_COP1_1
0.0556
p.P617T
DO229029
LICA
ICGC
SEAPSYIAVPDP
DEG_COP1_1
0.7031
p.S606R
DO220849
MELA
ICGC
SEAPSYIAVPDP
DEG_COP1_1
0.8538
p.S625C
SIDM00845
Burkitt's Lymphoma
GDSC
SEAPSYIAVPDP
DEG_COP1_1
0.1111
p.S625C
SIDM00461
Acute Myeloid Leukemia
GDSC
SEAPSYIAVPDP
DEG_COP1_1
0.1111
p.S625C
SIDM00946
T-Lymphoblastic Leukemia
GDSC
SEAPSYIAVPDP
DEG_COP1_1
0.1111
p.S625C
ACH-000786
Lymphoma
CCLE
SEAPSYIAVPDP
DEG_COP1_1
0.1111
p.S625C
ACH-000992
Head and Neck Cancer
CCLE
SEAPSYIAVPDP
DEG_COP1_1
0.1111
p.S625C
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
SEAPSYIAVPDP
DEG_COP1_1
0.1111
Drug responses associated with SCML2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SEAPSYIAVPDP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQR0
Sex comb on midleg-like protein 2
DEG_COP1_1
606:617
SEAPSYIAVPDP
COP1
0.9977
More...