DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SEDSHDYVNVPTA
Uniprot ID:
Q8IWV1
Source protein:
Lymphocyte transmembrane adapter 1
Source gene:
LAX1
Class:
DEG_COP1_1
Location:
187:199
E3 ligase:
COP1
DEGRON score:
0.9979
ASA_SCORE:
76.0615
COIL:
0.7617
CONS_SCORE:
0.8126
DSS_SCORE:
0.4089
HELIX:
0.1569
FCONS_SCORE:
1.309
RIG_SCORE:
0.7219
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A183T
TCGA-17-Z014
LUAD
TCGA
SEDSHDYVNVPTA
DEG_COP1_1
0.2222
p.A183T
TCGA-XK-AAIW
PRAD
TCGA
SEDSHDYVNVPTA
DEG_COP1_1
0.2222
p.S208C
TCGA-34-5927
LUSC
TCGA
SEDSHDYVNVPTA
DEG_COP1_1
0.0833
p.A199S
TCGA-38-4626
LUAD
TCGA
SEDSHDYVNVPTA
DEG_COP1_1
0.7588
p.S190L
TCGA-AA-3984
COAD
TCGA
SEDSHDYVNVPTA
DEG_COP1_1
0.6556
p.E204D
TCGA-AX-A05Z
UCEC
TCGA
SEDSHDYVNVPTA
DEG_COP1_1
0.1944
p.P197H
TCGA-OR-A5KB
ACC
TCGA
SEDSHDYVNVPTA
DEG_COP1_1
0.7694
p.S187L
TCGA-ZF-AA58
BLCA
TCGA
SEDSHDYVNVPTA
DEG_COP1_1
0.7667
p.S197P
DO48368
BLCA
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.6752
p.V202F
DO228362
LICA
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.25
p.A187S
DO228986
LICA
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.7588
p.S205I
DO229029
LICA
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.1667
p.A183S
DO24447
LUAD
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.2222
p.T206N
DO45390
LUAD
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.1389
p.L200V
DO45390
LUAD
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.3056
p.S192C
DO27731
LUSC
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.7541
p.L209M
DO46334
OV
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.0556
p.P196H
DO38033
SKCM
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.7694
p.E188D
DO40884
UCEC
ICGC
SEDSHDYVNVPTA
DEG_COP1_1
0.5647
Drug responses associated with LAX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SEDSHDYVNVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IWV1
Lymphocyte transmembrane adapter 1
DEG_COP1_1
187:199
SEDSHDYVNVPTA
COP1
0.9979
More...