DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SEDTGE
Uniprot ID:
Q8NCN5
Source protein:
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial
Source gene:
PDPR
Class:
DEG_Kelch_Keap1_1
Location:
821:826
E3 ligase:
KEAP1
DEGRON score:
0.5368
ASA_SCORE:
80.4833
COIL:
0.8415
CONS_SCORE:
0.2292
DSS_SCORE:
0.1962
HELIX:
0.1082
FCONS_SCORE:
0.6472
RIG_SCORE:
0.7762
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F816C
TCGA-06-0646
GBM
TCGA
SEDTGE
DEG_Kelch_Keap1_1
0.1944
p.F816C
DO13791
GBM
ICGC
SEDTGE
DEG_Kelch_Keap1_1
0.1944
p.T824A
TCGA-17-Z032
LUAD
TCGA
SEDTGE
DEG_Kelch_Keap1_1
0.7139
p.V829G
TCGA-D3-A51T
SKCM
TCGA
SEDTGE
DEG_Kelch_Keap1_1
0.25
p.V829G
DO47389
SKCM
ICGC
SEDTGE
DEG_Kelch_Keap1_1
0.25
p.T824M
TCGA-EO-A3AY
UCEC
TCGA
SEDTGE
DEG_Kelch_Keap1_1
0.7423
p.T824M
DO222492
COCA
ICGC
SEDTGE
DEG_Kelch_Keap1_1
0.7423
p.T824M
DO43202
UCEC
ICGC
SEDTGE
DEG_Kelch_Keap1_1
0.7423
p.N819S
DO51973
CLLE
ICGC
SEDTGE
DEG_Kelch_Keap1_1
0.2778
p.C813F
DO50859
LIRI
ICGC
SEDTGE
DEG_Kelch_Keap1_1
0.1111
p.NR836NW
DO222402
MELA
ICGC
SEDTGE
DEG_Kelch_Keap1_1
0
p.N819H
SIDM00690
Head and Neck Carcinoma
GDSC
SEDTGE
DEG_Kelch_Keap1_1
0.2778
p.G815S
ACH-001841
Bile Duct Cancer
CCLE
SEDTGE
DEG_Kelch_Keap1_1
0.1667
Drug responses associated with PDPR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SEDTGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NCN5
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial
DEG_Kelch_Keap1_1
821:826
SEDTGE
KEAP1
0.5368
More...