DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SGEKQVPTL
Uniprot ID:
Q9UL62
Source protein:
Short transient receptor potential channel 5
Source gene:
TRPC5
Class:
DEG_COP1_1
Location:
122:130
E3 ligase:
COP1
DEGRON score:
0.5892
ASA_SCORE:
77.9556
COIL:
0.7157
CONS_SCORE:
0.4398
DSS_SCORE:
0.3498
HELIX:
0.0878
FCONS_SCORE:
0.8597
RIG_SCORE:
0.7419
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S122R
TCGA-17-Z062
LUAD
TCGA
SGEKQVPTL
DEG_COP1_1
0.7427
p.Y118S
TCGA-22-1005
LUSC
TCGA
SGEKQVPTL
DEG_COP1_1
0.2222
p.Y118S
DO26632
LUSC
ICGC
SGEKQVPTL
DEG_COP1_1
0.2222
p.R120P
TCGA-78-7155
LUAD
TCGA
SGEKQVPTL
DEG_COP1_1
0.2778
p.R120P
DO23590
LUAD
ICGC
SGEKQVPTL
DEG_COP1_1
0.2778
p.T134M
TCGA-85-8071
LUSC
TCGA
SGEKQVPTL
DEG_COP1_1
0.2222
p.T134M
DO26755
LUSC
ICGC
SGEKQVPTL
DEG_COP1_1
0.2222
p.T134S
TCGA-91-A4BC
LUAD
TCGA
SGEKQVPTL
DEG_COP1_1
0.2222
p.T134S
DO45422
LUAD
ICGC
SGEKQVPTL
DEG_COP1_1
0.2222
p.Q126H
TCGA-98-A53H
LUSC
TCGA
SGEKQVPTL
DEG_COP1_1
0.647
p.Q126H
DO219181
LUSC
ICGC
SGEKQVPTL
DEG_COP1_1
0.647
p.R120W
TCGA-A5-A0G2
UCEC
TCGA
SGEKQVPTL
DEG_COP1_1
0.2778
p.R120W
DO41235
UCEC
ICGC
SGEKQVPTL
DEG_COP1_1
0.2778
p.R120W
SIDM02073
Colorectal Carcinoma
GDSC
SGEKQVPTL
DEG_COP1_1
0.2778
p.E113Q
TCGA-VS-A9UA
CESC
TCGA
SGEKQVPTL
DEG_COP1_1
0.0833
p.E113Q
DO219730
CESC
ICGC
SGEKQVPTL
DEG_COP1_1
0.0833
p.F136L
DO8264
COAD
ICGC
SGEKQVPTL
DEG_COP1_1
0.1667
p.Q126K
DO229027
LICA
ICGC
SGEKQVPTL
DEG_COP1_1
0.5833
p.Q135K
DO229026
LICA
ICGC
SGEKQVPTL
DEG_COP1_1
0.1944
p.G123R
DO220851
MELA
ICGC
SGEKQVPTL
DEG_COP1_1
0.6457
p.G123R
SIDM00336
Melanoma
GDSC
SGEKQVPTL
DEG_COP1_1
0.6457
p.G123R
ACH-000881
Skin Cancer
CCLE
SGEKQVPTL
DEG_COP1_1
0.6457
p.G123R
MEL-JUSO
skin
COSMIC
SGEKQVPTL
DEG_COP1_1
0.6457
p.D133G
ACH-001413
Bladder Cancer
CCLE
SGEKQVPTL
DEG_COP1_1
0.25
Drug responses associated with TRPC5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SGEKQVPTL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UL62
Short transient receptor potential channel 5
DEG_COP1_1
122:130
SGEKQVPTL
COP1
0.5892
More...