DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SGEPTPQK
Uniprot ID:
Q9H6A9
Source protein:
Pecanex-like protein 3
Source gene:
PCNX3
Class:
DEG_SCF_SKP2-CKS1_1
Location:
287:294
E3 ligase:
SKP2,CSK1
DEGRON score:
0.7569
ASA_SCORE:
92.7
COIL:
0.9243
CONS_SCORE:
0.3378
DSS_SCORE:
0.7547
HELIX:
0.0345
FCONS_SCORE:
0.9166
RIG_SCORE:
0.5471
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D283N
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
SGEPTPQK
DEG_SCF_SKP2-CKS1_1
0.2222
p.D283N
SIDM00773
Non-Cancerous
GDSC
SGEPTPQK
DEG_SCF_SKP2-CKS1_1
0.2222
p.D283N
SIDM00721
Small Cell Lung Carcinoma
GDSC
SGEPTPQK
DEG_SCF_SKP2-CKS1_1
0.2222
p.D283N
SIDM00774
Breast Carcinoma
GDSC
SGEPTPQK
DEG_SCF_SKP2-CKS1_1
0.2222
p.T291M
SIDM00014
Colorectal Carcinoma
GDSC
SGEPTPQK
DEG_SCF_SKP2-CKS1_1
0.8534
p.T291M
LIM1215
large_intestine
COSMIC
SGEPTPQK
DEG_SCF_SKP2-CKS1_1
0.8534
Drug responses associated with PCNX3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SGEPTPQK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H6A9
Pecanex-like protein 3
DEG_SCF_SKP2-CKS1_1
287:294
SGEPTPQK
SKP2,CSK1
0.7569
More...