DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SGPELGLVPSP
Uniprot ID:
P51617
Source protein:
Interleukin-1 receptor-associated kinase 1
Source gene:
IRAK1
Class:
DEG_COP1_1
Location:
154:164
E3 ligase:
COP1
DEGRON score:
0.9977
ASA_SCORE:
75.1727
COIL:
0.9311
CONS_SCORE:
0.3238
DSS_SCORE:
0.6312
HELIX:
0.028
FCONS_SCORE:
0.9717
RIG_SCORE:
0.5949
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P148L
TCGA-23-2649
OV
TCGA
SGPELGLVPSP
DEG_COP1_1
0.1667
p.P169A
TCGA-A6-2683
COAD
TCGA
SGPELGLVPSP
DEG_COP1_1
0.1944
p.P156R
TCGA-ZF-A9RL
BLCA
TCGA
SGPELGLVPSP
DEG_COP1_1
0.6401
p.A172D
DO229041
LICA
ICGC
SGPELGLVPSP
DEG_COP1_1
0.1111
p.E152D
DO45346
LUAD
ICGC
SGPELGLVPSP
DEG_COP1_1
0.2778
p.P174L
DO31779
OV
ICGC
SGPELGLVPSP
DEG_COP1_1
0.0556
p.P162Q
DO37866
SKCM
ICGC
SGPELGLVPSP
DEG_COP1_1
0.7035
p.R159L
DO50279
SKCM
ICGC
SGPELGLVPSP
DEG_COP1_1
0.8428
p.T152S
SIDM00426
Rhabdomyosarcoma
GDSC
SGPELGLVPSP
DEG_COP1_1
0.2778
p.T152S
ACH-000100
Sarcoma
CCLE
SGPELGLVPSP
DEG_COP1_1
0.2778
p.T152S
ACH-001765
Sarcoma
CCLE
SGPELGLVPSP
DEG_COP1_1
0.2778
p.T152S
RH-41
soft_tissue
COSMIC
SGPELGLVPSP
DEG_COP1_1
0.2778
p.P162S
SIDM01186
Breast Carcinoma
GDSC
SGPELGLVPSP
DEG_COP1_1
0.6752
p.P162S
ACH-000554
Breast Cancer
CCLE
SGPELGLVPSP
DEG_COP1_1
0.6752
p.P162S
UACC-893
breast
COSMIC
SGPELGLVPSP
DEG_COP1_1
0.6752
p.A151T
RCH-ACV
haematopoietic_and_lymphoid_tissue
COSMIC
SGPELGLVPSP
DEG_COP1_1
0.25
Drug responses associated with IRAK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00749
LUAD|lung_NSCLC_adenocarcinoma
p.E393K (No)
GDSC
WZ3105
16.7536
SIDM00095
GBM|glioma
p.R366C (No)
GDSC
WZ3105
0.6666
SIDM00932
KIRC|kidney
p.V642M (No)
GDSC
WZ3105
4.9105
SIDM00651
UNCLASSIFIED|lung_NSCLC_large_cell
p.P658L (No)
GDSC
WZ3105
24.2807
SIDM00212
GBM|glioma
p.V642M (No)
GDSC
WZ3105
0.9105
SIDM01090
COREAD|large_intestine
p.C203S (No)
GDSC
WZ3105
0.2097
SIDM00529
BRCA|breast
p.P173L (Yes)
GDSC
WZ3105
0.5606
SIDM00756
LUAD|lung_NSCLC_adenocarcinoma
p.S690G (No)
GDSC
WZ3105
25.4931
SIDM01186
BRCA|breast
p.P162S (Yes)
GDSC
WZ3105
0.4924
SIDM00530
ESCA|oesophagus
p.V586M (No)
GDSC
WZ3105
0.5288
SIDM00217
COREAD|large_intestine
p.L437P (No)
GDSC
WZ3105
0.1618
SIDM00807
BLCA|bladder
p.P173L (Yes)
GDSC
WZ3105
0.2911
SIDM00396
LAML|acute_myeloid_leukaemia
p.R366C (No)
GDSC
WZ3105
0.0764
SIDM00274
STAD|stomach
p.E516K (No)
GDSC
WZ3105
18.5283
SIDM00426
UNCLASSIFIED|rhabdomyosarcoma
p.T152S (Yes)
GDSC
WZ3105
0.5116
SIDM00567
MB|medulloblastoma
p.V188F (No)
GDSC
WZ3105
0.118
SIDM01140
UNCLASSIFIED|ovary
p.P173L (Yes)
GDSC
WZ3105
0.213
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.R69fs*6 (No)
GDSC
WZ3105
1.6705
SIDM01183
UNCLASSIFIED|lung_NSCLC_carcinoid
p.A651V (No)
GDSC
WZ3105
0.7103
SIDM00128
HNSC|head_and_neck
p.G530R (No)
GDSC
WZ3105
0.3456
SIDM01004
LCML|chronic_myeloid_leukaemia
p.L493_G494delLG (No)
GDSC
WZ3105
0.1956
SIDM00382
GBM|glioma
p.P218fs*68 (No)
GDSC
WZ3105
27.5385
SIDM00555
GBM|glioma
p.V586M (No)
GDSC
WZ3105
0.1686
SIDM00092
OV|ovary
p.S607R (No)
GDSC
WZ3105
1.9954
SIDM00048
LUAD|lung_NSCLC_adenocarcinoma
p.R194H (No)
GDSC
WZ3105
0.4596
SIDM00654
SCLC|lung_small_cell_carcinoma
p.R187Q (No)
GDSC
WZ3105
0.262
SIDM00579
NB|neuroblastoma
p.D169G (Yes)
GDSC
WZ3105
18.1424
SIDM00118
COREAD|large_intestine
p.V642A (No)
GDSC
WZ3105
0.4527
All proteins holding degron of SGPELGLVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51617
Interleukin-1 receptor-associated kinase 1
DEG_COP1_1
154:164
SGPELGLVPSP
COP1
0.9977
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