DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SGSQSSVPSV
Uniprot ID:
Q9UQE7
Source protein:
Structural maintenance of chromosomes protein 3
Source gene:
SMC3
Class:
DEG_COP1_1
Location:
1081:1090
E3 ligase:
COP1
DEGRON score:
0.7823
ASA_SCORE:
67.56
COIL:
0.8523
CONS_SCORE:
0.2197
DSS_SCORE:
0.6962
HELIX:
0.0902
FCONS_SCORE:
0.5518
RIG_SCORE:
0.5724
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F1093C
TCGA-F5-6814
READ
TCGA
SGSQSSVPSV
DEG_COP1_1
0.25
p.F1093C
DO36556
READ
ICGC
SGSQSSVPSV
DEG_COP1_1
0.25
p.S1089L
DO222617
BTCA
ICGC
SGSQSSVPSV
DEG_COP1_1
0.7667
p.SE1077RK
DO222837
MELA
ICGC
SGSQSSVPSV
DEG_COP1_1
0.4444
p.T1094I
SIDM01261
Breast Carcinoma
GDSC
SGSQSSVPSV
DEG_COP1_1
0.2222
p.T1094I
ACH-002208
Breast Cancer
CCLE
SGSQSSVPSV
DEG_COP1_1
0.2222
p.T1094I
YMB-1-E
breast
COSMIC
SGSQSSVPSV
DEG_COP1_1
0.2222
Drug responses associated with SMC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SGSQSSVPSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQE7
Structural maintenance of chromosomes protein 3
DEG_COP1_1
1081:1090
SGSQSSVPSV
COP1
0.7823
More...