DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SIGSALTVPSF
Uniprot ID:
Q96QT6
Source protein:
PHD finger protein 12
Source gene:
PHF12
Class:
DEG_COP1_1
Location:
706:716
E3 ligase:
COP1
DEGRON score:
0.8664
ASA_SCORE:
72.5909
COIL:
0.8396
CONS_SCORE:
0.3345
DSS_SCORE:
0.321
HELIX:
0.0495
FCONS_SCORE:
1.0748
RIG_SCORE:
0.7168
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T704M
TCGA-AA-A01R
COAD
TCGA
SIGSALTVPSF
DEG_COP1_1
0.2778
p.T704M
DO7934
COAD
ICGC
SIGSALTVPSF
DEG_COP1_1
0.2778
p.V713L
TCGA-DA-A1IB
SKCM
TCGA
SIGSALTVPSF
DEG_COP1_1
0.6765
p.V713L
DO38033
SKCM
ICGC
SIGSALTVPSF
DEG_COP1_1
0.6765
p.S720F
TCGA-EO-A22X
UCEC
TCGA
SIGSALTVPSF
DEG_COP1_1
0.2222
p.S720F
DO43907
UCEC
ICGC
SIGSALTVPSF
DEG_COP1_1
0.2222
p.S706P
TCGA-EO-A3B0
UCEC
TCGA
SIGSALTVPSF
DEG_COP1_1
0.6752
p.S706P
DO219773
UCEC
ICGC
SIGSALTVPSF
DEG_COP1_1
0.6752
p.S709N
DO230312
COCA
ICGC
SIGSALTVPSF
DEG_COP1_1
0.7069
p.L726I
DO228948
LICA
ICGC
SIGSALTVPSF
DEG_COP1_1
0.0556
p.S701R
DO229027
LICA
ICGC
SIGSALTVPSF
DEG_COP1_1
0.1944
p.P702L
SIDM00057
Neuroblastoma
GDSC
SIGSALTVPSF
DEG_COP1_1
0.2222
p.P702L
ACH-000676
Brain Cancer
CCLE
SIGSALTVPSF
DEG_COP1_1
0.2222
p.P702L
ACH-002389
Neuroblastoma
CCLE
SIGSALTVPSF
DEG_COP1_1
0.2222
p.P702L
ACN
autonomic_ganglia
COSMIC
SIGSALTVPSF
DEG_COP1_1
0.2222
p.S706F
SIDM00140
Melanoma
GDSC
SIGSALTVPSF
DEG_COP1_1
0.7982
p.S706F
ACH-000968
Skin Cancer
CCLE
SIGSALTVPSF
DEG_COP1_1
0.7982
p.S706F
COLO-792
skin
COSMIC
SIGSALTVPSF
DEG_COP1_1
0.7982
p.N719K
SIDM01387
Small Cell Lung Carcinoma
GDSC
SIGSALTVPSF
DEG_COP1_1
0.25
p.N719K
ACH-000921
Lung Cancer
CCLE
SIGSALTVPSF
DEG_COP1_1
0.25
Drug responses associated with PHF12 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SIGSALTVPSF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96QT6
PHD finger protein 12
DEG_COP1_1
706:716
SIGSALTVPSF
COP1
0.8664
More...