DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SISTPPIVPDI
Uniprot ID:
O94913
Source protein:
Pre-mRNA cleavage complex 2 protein Pcf11
Source gene:
PCF11
Class:
DEG_COP1_1
Location:
184:194
E3 ligase:
COP1
DEGRON score:
0.9853
ASA_SCORE:
90.3818
COIL:
0.9187
CONS_SCORE:
0.32
DSS_SCORE:
0.4974
HELIX:
0.0662
FCONS_SCORE:
0.9539
RIG_SCORE:
0.6928
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K196N
TCGA-AA-A010
COAD
TCGA
SISTPPIVPDI
DEG_COP1_1
0.7222
p.K196N
TCGA-AP-A056
UCEC
TCGA
SISTPPIVPDI
DEG_COP1_1
0.7222
p.K196N
DO222884
COCA
ICGC
SISTPPIVPDI
DEG_COP1_1
0.7222
p.K196N
DO43971
UCEC
ICGC
SISTPPIVPDI
DEG_COP1_1
0.7222
p.Q202H
TCGA-AP-A1DP
UCEC
TCGA
SISTPPIVPDI
DEG_COP1_1
0.1111
p.Q202H
DO42336
UCEC
ICGC
SISTPPIVPDI
DEG_COP1_1
0.1111
p.P188L
TCGA-BQ-7050
KIRP
TCGA
SISTPPIVPDI
DEG_COP1_1
0.6471
p.P188L
DO20877
KIRP
ICGC
SISTPPIVPDI
DEG_COP1_1
0.6471
p.P188L
SIDM01078
Small Cell Lung Carcinoma
GDSC
SISTPPIVPDI
DEG_COP1_1
0.6471
p.P188L
ACH-000790
Lung Cancer
CCLE
SISTPPIVPDI
DEG_COP1_1
0.6471
p.P188L
SHP-77
lung
COSMIC
SISTPPIVPDI
DEG_COP1_1
0.6471
p.P192H
TCGA-CV-7100
HNSC
TCGA
SISTPPIVPDI
DEG_COP1_1
0.7694
p.P192H
DO15503
HNSC
ICGC
SISTPPIVPDI
DEG_COP1_1
0.7694
p.L198F
TCGA-DU-6407
LGG
TCGA
SISTPPIVPDI
DEG_COP1_1
0.2222
p.L198F
DO22295
LGG
ICGC
SISTPPIVPDI
DEG_COP1_1
0.2222
p.I190V
SIDM00694
Other Solid Cancers
GDSC
SISTPPIVPDI
DEG_COP1_1
0.5965
p.I190V
SIDM01664
Prostate Carcinoma
GDSC
SISTPPIVPDI
DEG_COP1_1
0.5965
p.Q195H
SIDM01588
Endometrial Carcinoma
GDSC
SISTPPIVPDI
DEG_COP1_1
0.3056
p.Q195H
ACH-000993
Endometrial/Uterine Cancer
CCLE
SISTPPIVPDI
DEG_COP1_1
0.3056
Drug responses associated with PCF11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SISTPPIVPDI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94913
Pre-mRNA cleavage complex 2 protein Pcf11
DEG_COP1_1
184:194
SISTPPIVPDI
COP1
0.9853
More...