DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SITLSQVPDL
Uniprot ID:
A8MWE9
Source protein:
EF-hand calcium-binding domain-containing protein 8
Source gene:
EFCAB8
Class:
DEG_COP1_1
Location:
33:42
E3 ligase:
COP1
DEGRON score:
0.9419
ASA_SCORE:
79.66
COIL:
0.7945
CONS_SCORE:
0.1585
DSS_SCORE:
0.5565
HELIX:
0.166
FCONS_SCORE:
0.7513
RIG_SCORE:
0.709
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R43M
DO233652
GACA
ICGC
SITLSQVPDL
DEG_COP1_1
0.3056
p.S28I
DO228952
LICA
ICGC
SITLSQVPDL
DEG_COP1_1
0.1944
p.P29S
DO222402
MELA
ICGC
SITLSQVPDL
DEG_COP1_1
0.2222
p.S29F
DO222710
MELA
ICGC
SITLSQVPDL
DEG_COP1_1
0.2222
p.S29F
ACH-001566
Skin Cancer
CCLE
SITLSQVPDL
DEG_COP1_1
0.2222
p.I34T
SIDM00517
Head and Neck Carcinoma
GDSC
SITLSQVPDL
DEG_COP1_1
0.5966
p.I34T
ACH-002239
Head and Neck Cancer
CCLE
SITLSQVPDL
DEG_COP1_1
0.5966
p.I34T
H3118
upper_aerodigestive_tract
COSMIC
SITLSQVPDL
DEG_COP1_1
0.5966
Drug responses associated with EFCAB8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SITLSQVPDL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MWE9
EF-hand calcium-binding domain-containing protein 8
DEG_COP1_1
33:42
SITLSQVPDL
COP1
0.9419
More...