DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SIYDPPVPDF
Uniprot ID:
P34949
Source protein:
Mannose-6-phosphate isomerase
Source gene:
MPI
Class:
DEG_COP1_1
Location:
336:345
E3 ligase:
COP1
DEGRON score:
0.7321
ASA_SCORE:
43.68
COIL:
0.5879
CONS_SCORE:
0.5538
DSS_SCORE:
0.333
HELIX:
0.022
FCONS_SCORE:
1.2816
RIG_SCORE:
0.7799
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E351K
TCGA-AG-3726
READ
TCGA
SIYDPPVPDF
DEG_COP1_1
0.1667
p.V352I
TCGA-AP-A0LG
UCEC
TCGA
SIYDPPVPDF
DEG_COP1_1
0.1389
p.D339G
TCGA-CM-5348
COAD
TCGA
SIYDPPVPDF
DEG_COP1_1
0.7198
p.R328Q
TCGA-EE-A2MM
SKCM
TCGA
SIYDPPVPDF
DEG_COP1_1
0.1111
p.S336L
TCGA-S5-AA26
BLCA
TCGA
SIYDPPVPDF
DEG_COP1_1
0.7667
p.S344L
DO480
BLCA
ICGC
SIYDPPVPDF
DEG_COP1_1
0.7667
p.V343F
DO228985
LICA
ICGC
SIYDPPVPDF
DEG_COP1_1
0.7068
p.G333V
DO229019
LICA
ICGC
SIYDPPVPDF
DEG_COP1_1
0.25
p.A339S
DO229032
LICA
ICGC
SIYDPPVPDF
DEG_COP1_1
0.7588
p.R331C
DO48687
LIRI
ICGC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.G332S
DO38214
STAD
ICGC
SIYDPPVPDF
DEG_COP1_1
0.2222
p.P350L
DO43755
UCEC
ICGC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00958
Chronic Myelogenous Leukemia
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00614
Hepatocellular Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00548
Squamous Cell Lung Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00590
Oral Cavity Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00260
Gastric Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00363
Acute Myeloid Leukemia
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00302
Other Solid Cancers
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00243
Other Solid Cancers
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00359
Colorectal Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM01551
Gastric Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00169
Head and Neck Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM00248
Gastric Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM01378
Ovarian Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM01451
Pancreatic Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM01756
Chronic Myelogenous Leukemia
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.T350M
SIDM01729
Endometrial Carcinoma
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1944
p.V352G
SIDM01217
Other Blood Cancers
GDSC
SIYDPPVPDF
DEG_COP1_1
0.1389
p.N340S
IHH-4
thyroid
COSMIC
SIYDPPVPDF
DEG_COP1_1
0.7069
p.P326T
LNCaP-Clone-FGC
prostate
COSMIC
SIYDPPVPDF
DEG_COP1_1
0.0556
p.P337T
LNCaP-Clone-FGC
prostate
COSMIC
SIYDPPVPDF
DEG_COP1_1
0.7031
p.N351S
IHH-4
thyroid
COSMIC
SIYDPPVPDF
DEG_COP1_1
0.1667
Drug responses associated with MPI mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SIYDPPVPDF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P34949
Mannose-6-phosphate isomerase
DEG_COP1_1
336:345
SIYDPPVPDF
COP1
0.7321
More...