DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKDTGE
Uniprot ID:
O15417
Source protein:
Trinucleotide repeat-containing gene 18 protein
Source gene:
TNRC18
Class:
DEG_Kelch_Keap1_1
Location:
2308:2313
E3 ligase:
KEAP1
DEGRON score:
0.8537
ASA_SCORE:
109.65
COIL:
0.9542
CONS_SCORE:
0.3816
DSS_SCORE:
0.731
HELIX:
0.0352
FCONS_SCORE:
0.9277
RIG_SCORE:
0.5605
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K2309R
ACH-001685
Lymphoma
CCLE
SKDTGE
DEG_Kelch_Keap1_1
0.6126
p.T2319M
SIDM00889
Cervical Carcinoma
GDSC
SKDTGE
DEG_Kelch_Keap1_1
0.6111
p.K2315R
SIDM00951
T-Lymphoblastic Leukemia
GDSC
SKDTGE
DEG_Kelch_Keap1_1
0.2778
p.K2315R
ACH-002222
Leukemia
CCLE
SKDTGE
DEG_Kelch_Keap1_1
0.2778
p.K2315R
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
SKDTGE
DEG_Kelch_Keap1_1
0.2778
p.K2301T
DO229234
THCA
ICGC
SKDTGE
DEG_Kelch_Keap1_1
0.25
p.R2302C
TCGA-B7-5816
STAD
TCGA
SKDTGE
DEG_Kelch_Keap1_1
0.1667
p.R2302C
DO38599
STAD
ICGC
SKDTGE
DEG_Kelch_Keap1_1
0.1667
p.G2321E
DO42673
UCEC
ICGC
SKDTGE
DEG_Kelch_Keap1_1
0.1111
p.G2321W
SIDM02034
Colorectal Carcinoma
GDSC
SKDTGE
DEG_Kelch_Keap1_1
0.1111
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Drug responses associated with TNRC18 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of SKDTGE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15417
Trinucleotide repeat-containing gene 18 protein
DEG_Kelch_Keap1_1
2308:2313
SKDTGE
KEAP1
0.8537
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