DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKDTGE
Uniprot ID:
O15417
Source protein:
Trinucleotide repeat-containing gene 18 protein
Source gene:
TNRC18
Class:
DEG_Kelch_Keap1_1
Location:
2308:2313
E3 ligase:
KEAP1
DEGRON score:
0.8537
ASA_SCORE:
109.65
COIL:
0.9542
CONS_SCORE:
0.3816
DSS_SCORE:
0.731
HELIX:
0.0352
FCONS_SCORE:
0.9277
RIG_SCORE:
0.5605
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R2302C
TCGA-B7-5816
STAD
TCGA
SKDTGE
DEG_Kelch_Keap1_1
0.1667
p.R2302C
DO38599
STAD
ICGC
SKDTGE
DEG_Kelch_Keap1_1
0.1667
p.K2301T
DO229234
THCA
ICGC
SKDTGE
DEG_Kelch_Keap1_1
0.25
p.G2321E
DO42673
UCEC
ICGC
SKDTGE
DEG_Kelch_Keap1_1
0.1111
p.G2321W
SIDM02034
Colorectal Carcinoma
GDSC
SKDTGE
DEG_Kelch_Keap1_1
0.1111
p.T2319M
SIDM00889
Cervical Carcinoma
GDSC
SKDTGE
DEG_Kelch_Keap1_1
0.6111
p.K2315R
SIDM00951
T-Lymphoblastic Leukemia
GDSC
SKDTGE
DEG_Kelch_Keap1_1
0.2778
p.K2315R
ACH-002222
Leukemia
CCLE
SKDTGE
DEG_Kelch_Keap1_1
0.2778
p.K2315R
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
SKDTGE
DEG_Kelch_Keap1_1
0.2778
p.K2309R
ACH-001685
Lymphoma
CCLE
SKDTGE
DEG_Kelch_Keap1_1
0.6126
Drug responses associated with TNRC18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKDTGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15417
Trinucleotide repeat-containing gene 18 protein
DEG_Kelch_Keap1_1
2308:2313
SKDTGE
KEAP1
0.8537
More...