DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SKENH
Uniprot ID:
Q8TEW0
Source protein:
Partitioning defective 3 homolog
Source gene:
PARD3
Class:
DEG_APCC_KENBOX_2
Location:
610:614
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6221
ASA_SCORE:
98.84
COIL:
0.8806
CONS_SCORE:
0.4609
DSS_SCORE:
0.2802
HELIX:
0.085
FCONS_SCORE:
0.5969
RIG_SCORE:
0.7097
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G618R
TCGA-AX-A06F
UCEC
TCGA
SKENH
DEG_APCC_KENBOX_2
0.2222
p.G618R
DO41752
UCEC
ICGC
SKENH
DEG_APCC_KENBOX_2
0.2222
p.S623F
TCGA-BG-A220
UCEC
TCGA
SKENH
DEG_APCC_KENBOX_2
0.0833
p.S623F
DO41784
UCEC
ICGC
SKENH
DEG_APCC_KENBOX_2
0.0833
p.L601F
TCGA-FR-A726
SKCM
TCGA
SKENH
DEG_APCC_KENBOX_2
0.0833
p.L601F
DO48665
SKCM
ICGC
SKENH
DEG_APCC_KENBOX_2
0.0833
p.A615T
TCGA-MX-A5UJ
STAD
TCGA
SKENH
DEG_APCC_KENBOX_2
0.3056
p.A615T
DO48547
STAD
ICGC
SKENH
DEG_APCC_KENBOX_2
0.3056
p.N613S
DO7505
CLLE
ICGC
SKENH
DEG_APCC_KENBOX_2
0.7069
p.S604N
DO231415
THCA
ICGC
SKENH
DEG_APCC_KENBOX_2
0.6111
p.R609Q
ACH-001032
Bone Cancer
CCLE
SKENH
DEG_APCC_KENBOX_2
0.3056
p.I619N
CW-2
large_intestine
COSMIC
SKENH
DEG_APCC_KENBOX_2
0.1944
p.H622N
CL-34
large_intestine
COSMIC
SKENH
DEG_APCC_KENBOX_2
0.2222
p.A617T
SNU-1040
large_intestine
COSMIC
SKENH
DEG_APCC_KENBOX_2
0.25
p.T604I
RC-K8
haematopoietic_and_lymphoid_tissue
COSMIC
SKENH
DEG_APCC_KENBOX_2
0.6111
p.H622Y
HT55
large_intestine
COSMIC
SKENH
DEG_APCC_KENBOX_2
0.2222
p.E612K
ME-180
cervix
COSMIC
SKENH
DEG_APCC_KENBOX_2
0.7022
Drug responses associated with PARD3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKENH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TEW0
Partitioning defective 3 homolog
DEG_APCC_KENBOX_2
610:614
SKENH
APC,CDC20,FZR1
0.6221
More...