DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SKSVIVPSGA
Uniprot ID:
Q8IYD1
Source protein:
Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
Source gene:
GSPT2
Class:
DEG_COP1_1
Location:
189:198
E3 ligase:
COP1
DEGRON score:
0.9924
ASA_SCORE:
78.4
COIL:
0.842
CONS_SCORE:
0.2204
DSS_SCORE:
0.5422
HELIX:
0.0954
FCONS_SCORE:
0.6207
RIG_SCORE:
0.6861
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E182G
TCGA-AA-3968
COAD
TCGA
SKSVIVPSGA
DEG_COP1_1
0.1389
p.E182G
DO9178
COAD
ICGC
SKSVIVPSGA
DEG_COP1_1
0.1389
p.V194I
TCGA-AP-A051
UCEC
TCGA
SKSVIVPSGA
DEG_COP1_1
0.7076
p.V194I
DO222655
BTCA
ICGC
SKSVIVPSGA
DEG_COP1_1
0.7076
p.V194I
DO42673
UCEC
ICGC
SKSVIVPSGA
DEG_COP1_1
0.7076
p.K201T
TCGA-AX-A1CE
UCEC
TCGA
SKSVIVPSGA
DEG_COP1_1
0.3611
p.K201T
DO42280
UCEC
ICGC
SKSVIVPSGA
DEG_COP1_1
0.3611
p.K183E
TCGA-BR-8297
STAD
TCGA
SKSVIVPSGA
DEG_COP1_1
0.2778
p.K183E
DO38555
STAD
ICGC
SKSVIVPSGA
DEG_COP1_1
0.2778
p.V206I
TCGA-CK-6751
COAD
TCGA
SKSVIVPSGA
DEG_COP1_1
0.1111
p.V206I
DO10340
COAD
ICGC
SKSVIVPSGA
DEG_COP1_1
0.1111
p.E184D
TCGA-D5-6927
COAD
TCGA
SKSVIVPSGA
DEG_COP1_1
0.1944
p.E184D
DO10332
COAD
ICGC
SKSVIVPSGA
DEG_COP1_1
0.1944
p.F208V
TCGA-EY-A1GD
UCEC
TCGA
SKSVIVPSGA
DEG_COP1_1
0.0556
p.F208V
DO42129
UCEC
ICGC
SKSVIVPSGA
DEG_COP1_1
0.0556
p.S196L
DO218176
BRCA
ICGC
SKSVIVPSGA
DEG_COP1_1
0.8778
p.M180T
DO23198
LINC
ICGC
SKSVIVPSGA
DEG_COP1_1
0.0833
p.A198S
DO50726
ORCA
ICGC
SKSVIVPSGA
DEG_COP1_1
0.7588
p.S189C
SIDM01265
Plasma Cell Myeloma
GDSC
SKSVIVPSGA
DEG_COP1_1
0.7541
p.S189C
ACH-000763
Myeloma
CCLE
SKSVIVPSGA
DEG_COP1_1
0.7541
p.S189C
MM1S
haematopoietic_and_lymphoid_tissue
COSMIC
SKSVIVPSGA
DEG_COP1_1
0.7541
p.E185K
ACH-001521
Skin Cancer
CCLE
SKSVIVPSGA
DEG_COP1_1
0.2222
Drug responses associated with GSPT2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SKSVIVPSGA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IYD1
Eukaryotic peptide chain release factor GTP-binding subunit ERF3B
DEG_COP1_1
189:198
SKSVIVPSGA
COP1
0.9924
More...