DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLDLHVPSL
Uniprot ID:
Q9NZ71
Source protein:
Regulator of telomere elongation helicase 1
Source gene:
RTEL1
Class:
DEG_COP1_1
Location:
791:799
E3 ligase:
COP1
DEGRON score:
0.999
ASA_SCORE:
80.1778
COIL:
0.7786
CONS_SCORE:
0.2665
DSS_SCORE:
0.5383
HELIX:
0.1623
FCONS_SCORE:
1.1631
RIG_SCORE:
0.713
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F807L
TCGA-93-8067
LUAD
TCGA
SLDLHVPSL
DEG_COP1_1
0.1111
p.V798A
TCGA-AZ-6601
COAD
TCGA
SLDLHVPSL
DEG_COP1_1
0.6936
p.G794R
TCGA-D1-A0ZO
UCEC
TCGA
SLDLHVPSL
DEG_COP1_1
0.7568
p.P804L
TCGA-DM-A28F
COAD
TCGA
SLDLHVPSL
DEG_COP1_1
0.1944
p.R786W
TCGA-EK-A2RA
CESC
TCGA
SLDLHVPSL
DEG_COP1_1
0.6389
p.A809T
DO10140
COAD
ICGC
SLDLHVPSL
DEG_COP1_1
0.0556
p.K790N
DO15599
HNSC
ICGC
SLDLHVPSL
DEG_COP1_1
0.3056
p.G781V
DO228974
LICA
ICGC
SLDLHVPSL
DEG_COP1_1
0.0556
p.F783L
DO25113
LUAD
ICGC
SLDLHVPSL
DEG_COP1_1
0.1111
p.Q801H
DO25396
LUAD
ICGC
SLDLHVPSL
DEG_COP1_1
0.2778
p.S798R
DO219161
LUSC
ICGC
SLDLHVPSL
DEG_COP1_1
0.8538
p.S798R
SIDM00878
Breast Carcinoma
GDSC
SLDLHVPSL
DEG_COP1_1
0.8538
p.S798R
ACH-000930
Breast Cancer
CCLE
SLDLHVPSL
DEG_COP1_1
0.8538
p.S798R
HCC1569
breast
COSMIC
SLDLHVPSL
DEG_COP1_1
0.8538
p.G805R
DO46657
PAAD
ICGC
SLDLHVPSL
DEG_COP1_1
0.1667
p.A789V
DO51499
PACA
ICGC
SLDLHVPSL
DEG_COP1_1
0.2778
p.R787M
DO37407
SKCM
ICGC
SLDLHVPSL
DEG_COP1_1
0.2222
p.S806L
SIDM01113
Other Sarcomas
GDSC
SLDLHVPSL
DEG_COP1_1
0.1389
p.S806L
ACH-000939
Sarcoma
CCLE
SLDLHVPSL
DEG_COP1_1
0.1389
p.H795Y
ACH-000437
Brain Cancer
CCLE
SLDLHVPSL
DEG_COP1_1
0.6118
p.L799V
TGBC24TKB
biliary_tract
COSMIC
SLDLHVPSL
DEG_COP1_1
0.5654
p.L799V
KO52
haematopoietic_and_lymphoid_tissue
COSMIC
SLDLHVPSL
DEG_COP1_1
0.5654
p.L799V
NCI-SNU-16
stomach
COSMIC
SLDLHVPSL
DEG_COP1_1
0.5654
p.L799V
LU-134-A
lung
COSMIC
SLDLHVPSL
DEG_COP1_1
0.5654
p.A784P
IGROV-1
ovary
COSMIC
SLDLHVPSL
DEG_COP1_1
0.1389
p.S807L
PEO1
ovary
COSMIC
SLDLHVPSL
DEG_COP1_1
0.1111
Drug responses associated with RTEL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLDLHVPSL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZ71
Regulator of telomere elongation helicase 1
DEG_COP1_1
791:799
SLDLHVPSL
COP1
0.999
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