DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLEAVEVPSM
Uniprot ID:
Q9UQ35
Source protein:
Serine/arginine repetitive matrix protein 2
Source gene:
SRRM2
Class:
DEG_COP1_1
Location:
1292:1301
E3 ligase:
COP1
DEGRON score:
0.929
ASA_SCORE:
99.53
COIL:
0.8154
CONS_SCORE:
0.331
DSS_SCORE:
0.5382
HELIX:
0.1405
FCONS_SCORE:
0.9445
RIG_SCORE:
0.6935
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1290L
TCGA-12-0829
GBM
TCGA
SLEAVEVPSM
DEG_COP1_1
0.2778
p.Q1290L
DO11166
GBM
ICGC
SLEAVEVPSM
DEG_COP1_1
0.2778
p.L1282F
TCGA-61-2087
OV
TCGA
SLEAVEVPSM
DEG_COP1_1
0.0556
p.L1282F
DO32039
OV
ICGC
SLEAVEVPSM
DEG_COP1_1
0.0556
p.Q1290H
TCGA-DU-6392
LGG
TCGA
SLEAVEVPSM
DEG_COP1_1
0.2778
p.Q1290H
DO22237
LGG
ICGC
SLEAVEVPSM
DEG_COP1_1
0.2778
p.A1291V
TCGA-DU-6392
LGG
TCGA
SLEAVEVPSM
DEG_COP1_1
0.3056
p.A1291V
DO22237
LGG
ICGC
SLEAVEVPSM
DEG_COP1_1
0.3056
p.D1285N
DO225366
BRCA
ICGC
SLEAVEVPSM
DEG_COP1_1
0.1389
p.L1293V
DO233830
GACA
ICGC
SLEAVEVPSM
DEG_COP1_1
0.5654
p.S1304F
DO228322
MALY
ICGC
SLEAVEVPSM
DEG_COP1_1
0.25
p.G1306S
DO232761
PBCA
ICGC
SLEAVEVPSM
DEG_COP1_1
0.1944
p.S1292A
SIDM00929
Chondrosarcoma
GDSC
SLEAVEVPSM
DEG_COP1_1
0.7588
p.S1292A
SIDM00721
Small Cell Lung Carcinoma
GDSC
SLEAVEVPSM
DEG_COP1_1
0.7588
p.S1311F
SIDM01753
Gastric Carcinoma
GDSC
SLEAVEVPSM
DEG_COP1_1
0.5
Drug responses associated with SRRM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLEAVEVPSM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQ35
Serine/arginine repetitive matrix protein 2
DEG_COP1_1
1292:1301
SLEAVEVPSM
COP1
0.929
More...