DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLERTPTK
Uniprot ID:
Q9ULM3
Source protein:
YEATS domain-containing protein 2
Source gene:
YEATS2
Class:
DEG_SCF_SKP2-CKS1_1
Location:
403:410
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9904
ASA_SCORE:
100.2125
COIL:
0.812
CONS_SCORE:
0.395
DSS_SCORE:
0.5155
HELIX:
0.0466
FCONS_SCORE:
1.1503
RIG_SCORE:
0.7028
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q415H
TCGA-34-8454
LUSC
TCGA
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.1944
p.Q415H
DO50094
LUSC
ICGC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.1944
p.P401L
TCGA-B5-A3FA
UCEC
TCGA
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.2778
p.P401L
DO52402
UCEC
ICGC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.2778
p.M411T
TCGA-EE-A20B
SKCM
TCGA
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.3056
p.M411T
DO37547
SKCM
ICGC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.3056
p.K416N
TCGA-F5-6814
READ
TCGA
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.2778
p.K416N
DO36556
READ
ICGC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.2778
p.L400F
DO52743
CMDI
ICGC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.25
p.P396L
DO234183
ESAD
ICGC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.1389
p.T407A
SIDM01007
T-Lymphoblastic Leukemia
GDSC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.825
p.T407A
ACH-002256
Leukemia
CCLE
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.825
p.T407A
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.825
p.M411R
SIDM00761
Small Cell Lung Carcinoma
GDSC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.3056
p.M411R
ACH-000752
Lung Cancer
CCLE
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.3056
p.M411R
NCI-H196
lung
COSMIC
SLERTPTK
DEG_SCF_SKP2-CKS1_1
0.3056
Drug responses associated with YEATS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLERTPTK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULM3
YEATS domain-containing protein 2
DEG_SCF_SKP2-CKS1_1
403:410
SLERTPTK
SKP2,CSK1
0.9904
More...