DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLFSLPVPSL
Uniprot ID:
Q5SQQ9
Source protein:
Ventral anterior homeobox 1
Source gene:
VAX1
Class:
DEG_COP1_1
Location:
271:280
E3 ligase:
COP1
DEGRON score:
0.8234
ASA_SCORE:
46.76
COIL:
0.7663
CONS_SCORE:
0.491
DSS_SCORE:
0.2342
HELIX:
0.1432
FCONS_SCORE:
1.2783
RIG_SCORE:
0.7475
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L281R
TCGA-L5-A43E
ESCA
TCGA
SLFSLPVPSL
DEG_COP1_1
0.3056
p.R287S
TCGA-OR-A5KB
ACC
TCGA
SLFSLPVPSL
DEG_COP1_1
0.1389
p.S283A
DO50349
ESAD
ICGC
SLFSLPVPSL
DEG_COP1_1
0.25
p.P266L
DO233749
GACA
ICGC
SLFSLPVPSL
DEG_COP1_1
0.1944
p.L272I
DO229028
LICA
ICGC
SLFSLPVPSL
DEG_COP1_1
0.6063
p.A265S
SIDM02021
Esophageal Carcinoma
GDSC
SLFSLPVPSL
DEG_COP1_1
0.1667
p.A265T
SIDM00447
B-Lymphoblastic Leukemia
GDSC
SLFSLPVPSL
DEG_COP1_1
0.1667
Drug responses associated with VAX1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLFSLPVPSL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5SQQ9
Ventral anterior homeobox 1
DEG_COP1_1
271:280
SLFSLPVPSL
COP1
0.8234
More...