DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
SLSSSVPEA
Uniprot ID:
O75128
Source protein:
Protein cordon-bleu
Source gene:
COBL
Class:
DEG_COP1_1
Location:
751:759
E3 ligase:
COP1
DEGRON score:
0.9897
ASA_SCORE:
88.0778
COIL:
0.8862
CONS_SCORE:
0.3695
DSS_SCORE:
0.3499
HELIX:
0.0692
FCONS_SCORE:
0.8689
RIG_SCORE:
0.7165
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G765V
TCGA-53-7624
LUAD
TCGA
SLSSSVPEA
DEG_COP1_1
0.1667
p.G765V
DO25058
LUAD
ICGC
SLSSSVPEA
DEG_COP1_1
0.1667
p.S761Y
TCGA-AP-A051
UCEC
TCGA
SLSSSVPEA
DEG_COP1_1
0.2778
p.S761Y
DO229035
LICA
ICGC
SLSSSVPEA
DEG_COP1_1
0.2778
p.S761Y
DO42673
UCEC
ICGC
SLSSSVPEA
DEG_COP1_1
0.2778
p.L752P
TCGA-AP-A1DK
UCEC
TCGA
SLSSSVPEA
DEG_COP1_1
0.6471
p.L752P
DO42033
UCEC
ICGC
SLSSSVPEA
DEG_COP1_1
0.6471
p.A744T
TCGA-AP-A1DV
UCEC
TCGA
SLSSSVPEA
DEG_COP1_1
0.1389
p.A744T
DO43186
UCEC
ICGC
SLSSSVPEA
DEG_COP1_1
0.1389
p.G746C
TCGA-BR-6452
STAD
TCGA
SLSSSVPEA
DEG_COP1_1
0.1944
p.G746C
DO38404
STAD
ICGC
SLSSSVPEA
DEG_COP1_1
0.1944
p.S741G
TCGA-EM-A2CM
THCA
TCGA
SLSSSVPEA
DEG_COP1_1
0.5
p.S741G
DO39228
THCA
ICGC
SLSSSVPEA
DEG_COP1_1
0.5
p.E769K
TCGA-EO-A22U
UCEC
TCGA
SLSSSVPEA
DEG_COP1_1
0.0556
p.E769K
DO43755
UCEC
ICGC
SLSSSVPEA
DEG_COP1_1
0.0556
p.G765W
TCGA-ER-A1A1
SKCM
TCGA
SLSSSVPEA
DEG_COP1_1
0.1667
p.G765W
DO37413
SKCM
ICGC
SLSSSVPEA
DEG_COP1_1
0.1667
p.S753C
TCGA-VP-A879
PRAD
TCGA
SLSSSVPEA
DEG_COP1_1
0.7541
p.S753C
DO51382
PRAD
ICGC
SLSSSVPEA
DEG_COP1_1
0.7541
p.P763T
DO228952
LICA
ICGC
SLSSSVPEA
DEG_COP1_1
0.2222
p.P757T
DO229022
LICA
ICGC
SLSSSVPEA
DEG_COP1_1
0.7031
p.N751K
SIDM00080
Melanoma
GDSC
SLSSSVPEA
DEG_COP1_1
0.6918
p.N751K
SK-MEL-5
skin
COSMIC
SLSSSVPEA
DEG_COP1_1
0.6918
p.Q750K
SIDM01245
T-Lymphoblastic Leukemia
GDSC
SLSSSVPEA
DEG_COP1_1
0.3056
p.Q750K
BE-13
haematopoietic_and_lymphoid_tissue
COSMIC
SLSSSVPEA
DEG_COP1_1
0.3056
p.E760K
ACH-000987
Skin Cancer
CCLE
SLSSSVPEA
DEG_COP1_1
0.3056
p.E760K
Mewo
skin
COSMIC
SLSSSVPEA
DEG_COP1_1
0.3056
p.R768G
ACH-001793
Liposarcoma
CCLE
SLSSSVPEA
DEG_COP1_1
0.0833
Drug responses associated with COBL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLSSSVPEA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75128
Protein cordon-bleu
DEG_COP1_1
751:759
SLSSSVPEA
COP1
0.9897
More...