DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLTPDVPEA
Uniprot ID:
Q9NZC9
Source protein:
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
Source gene:
SMARCAL1
Class:
DEG_COP1_1
Location:
415:423
E3 ligase:
COP1
DEGRON score:
0.5283
ASA_SCORE:
78.8778
COIL:
0.7569
CONS_SCORE:
0.3229
DSS_SCORE:
0.368
HELIX:
0.2192
FCONS_SCORE:
0.8419
RIG_SCORE:
0.7288
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K411N
TCGA-43-6770
LUSC
TCGA
SLTPDVPEA
DEG_COP1_1
0.6667
p.K411N
DO27644
LUSC
ICGC
SLTPDVPEA
DEG_COP1_1
0.6667
p.E427K
TCGA-P3-A5QF
HNSC
TCGA
SLTPDVPEA
DEG_COP1_1
0.2222
p.E427K
DO44439
HNSC
ICGC
SLTPDVPEA
DEG_COP1_1
0.2222
p.V420F
DO229029
LICA
ICGC
SLTPDVPEA
DEG_COP1_1
0.7068
p.V433M
SIDM01020
Plasma Cell Myeloma
GDSC
SLTPDVPEA
DEG_COP1_1
0.0556
p.V433M
SIDM01617
Endometrial Carcinoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.0556
p.V433M
ACH-000380
Myeloma
CCLE
SLTPDVPEA
DEG_COP1_1
0.0556
p.V433M
ACH-000994
Endometrial/Uterine Cancer
CCLE
SLTPDVPEA
DEG_COP1_1
0.0556
p.V433M
KMS-12-BM
haematopoietic_and_lymphoid_tissue
COSMIC
SLTPDVPEA
DEG_COP1_1
0.0556
p.L432V
SIDM00884
Breast Carcinoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.0833
p.L432V
ACH-000699
Breast Cancer
CCLE
SLTPDVPEA
DEG_COP1_1
0.0833
p.L432V
HCC1395
breast
COSMIC
SLTPDVPEA
DEG_COP1_1
0.0833
p.D424V
SIDM00987
Thyroid Gland Carcinoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.3056
p.D424V
SIDM00227
Neuroblastoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.3056
p.D424V
SIDM00657
Acute Myeloid Leukemia
GDSC
SLTPDVPEA
DEG_COP1_1
0.3056
p.D424V
SIDM00259
Neuroblastoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.3056
p.D424V
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.3056
p.D424V
SIDM01765
Osteosarcoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.3056
p.S415G
SIDM01021
Glioblastoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.6993
p.V420A
SIDM00163
Biliary Tract Carcinoma
GDSC
SLTPDVPEA
DEG_COP1_1
0.6936
p.K431Q
ACH-002023
Colon/Colorectal Cancer
CCLE
SLTPDVPEA
DEG_COP1_1
0.5556
Drug responses associated with SMARCAL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLTPDVPEA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NZC9
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
DEG_COP1_1
415:423
SLTPDVPEA
COP1
0.5283
More...