DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SLVTALSVPTI
Uniprot ID:
Q5HYM0
Source protein:
Probable ribonuclease ZC3H12B
Source gene:
ZC3H12B
Class:
DEG_COP1_1
Location:
464:474
E3 ligase:
COP1
DEGRON score:
0.8234
ASA_SCORE:
84
COIL:
0.8041
CONS_SCORE:
0.4114
DSS_SCORE:
0.4239
HELIX:
0.1699
FCONS_SCORE:
1.0224
RIG_SCORE:
0.714
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G483R
TCGA-17-Z001
LUAD
TCGA
SLVTALSVPTI
DEG_COP1_1
0.0833
p.P475T
TCGA-21-5783
LUSC
TCGA
SLVTALSVPTI
DEG_COP1_1
0.3056
p.P475T
DO27437
LUSC
ICGC
SLVTALSVPTI
DEG_COP1_1
0.3056
p.P475T
SIDM00498
Colorectal Carcinoma
GDSC
SLVTALSVPTI
DEG_COP1_1
0.3056
p.P475T
ACH-000970
Colon/Colorectal Cancer
CCLE
SLVTALSVPTI
DEG_COP1_1
0.3056
p.P475T
SNU-C5
large_intestine
COSMIC
SLVTALSVPTI
DEG_COP1_1
0.3056
p.P463H
TCGA-46-3767
LUSC
TCGA
SLVTALSVPTI
DEG_COP1_1
0.3056
p.P463H
DO26650
LUSC
ICGC
SLVTALSVPTI
DEG_COP1_1
0.3056
p.G483C
TCGA-AJ-A2QO
UCEC
TCGA
SLVTALSVPTI
DEG_COP1_1
0.0833
p.G483C
DO42177
UCEC
ICGC
SLVTALSVPTI
DEG_COP1_1
0.0833
p.V471L
TCGA-BR-8361
STAD
TCGA
SLVTALSVPTI
DEG_COP1_1
0.6765
p.V471L
DO48032
STAD
ICGC
SLVTALSVPTI
DEG_COP1_1
0.6765
p.P472L
TCGA-D3-A2JF
SKCM
TCGA
SLVTALSVPTI
DEG_COP1_1
0.7582
p.P472L
DO38153
SKCM
ICGC
SLVTALSVPTI
DEG_COP1_1
0.7582
p.P457L
TCGA-DF-A2KU
UCEC
TCGA
SLVTALSVPTI
DEG_COP1_1
0.1389
p.P457L
DO223286
UCEC
ICGC
SLVTALSVPTI
DEG_COP1_1
0.1389
p.P463L
TCGA-EE-A3AC
SKCM
TCGA
SLVTALSVPTI
DEG_COP1_1
0.3056
p.P463L
DO37631
SKCM
ICGC
SLVTALSVPTI
DEG_COP1_1
0.3056
p.P457S
TCGA-FI-A2D5
UCEC
TCGA
SLVTALSVPTI
DEG_COP1_1
0.1389
p.P457S
DO41331
UCEC
ICGC
SLVTALSVPTI
DEG_COP1_1
0.1389
p.A454D
DO34192
PACA
ICGC
SLVTALSVPTI
DEG_COP1_1
0.0556
p.I474V
ACH-001451
Cervical Cancer
CCLE
SLVTALSVPTI
DEG_COP1_1
0.5965
Drug responses associated with ZC3H12B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SLVTALSVPTI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5HYM0
Probable ribonuclease ZC3H12B
DEG_COP1_1
464:474
SLVTALSVPTI
COP1
0.8234
More...