DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SMESIHVPDP
Uniprot ID:
Q96RP9
Source protein:
Elongation factor G, mitochondrial
Source gene:
GFM1
Class:
DEG_COP1_1
Location:
440:449
E3 ligase:
COP1
DEGRON score:
0.9401
ASA_SCORE:
62.5
COIL:
0.7888
CONS_SCORE:
0.6689
DSS_SCORE:
0.3572
HELIX:
0.0078
FCONS_SCORE:
1.1928
RIG_SCORE:
0.7513
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A454S
TCGA-06-5416
GBM
TCGA
SMESIHVPDP
DEG_COP1_1
0.1944
p.A454S
DO10880
GBM
ICGC
SMESIHVPDP
DEG_COP1_1
0.1944
p.S452L
TCGA-AA-3679
COAD
TCGA
SMESIHVPDP
DEG_COP1_1
0.25
p.S452L
DO8890
COAD
ICGC
SMESIHVPDP
DEG_COP1_1
0.25
p.D433Y
DO228976
LICA
ICGC
SMESIHVPDP
DEG_COP1_1
0.1389
p.V446F
DO229018
LICA
ICGC
SMESIHVPDP
DEG_COP1_1
0.7068
p.E430V
SIDM02050
Colorectal Carcinoma
GDSC
SMESIHVPDP
DEG_COP1_1
0.0556
p.G441C
SIDM00336
Melanoma
GDSC
SMESIHVPDP
DEG_COP1_1
0.76
p.G441C
MEL-JUSO
skin
COSMIC
SMESIHVPDP
DEG_COP1_1
0.76
p.M455L
ACH-000218
Leukemia
CCLE
SMESIHVPDP
DEG_COP1_1
0.1667
p.M455L
PL-21
haematopoietic_and_lymphoid_tissue
COSMIC
SMESIHVPDP
DEG_COP1_1
0.1667
p.N459H
ACH-000301
Leukemia
CCLE
SMESIHVPDP
DEG_COP1_1
0.0556
p.N459H
LAMA-84
haematopoietic_and_lymphoid_tissue
COSMIC
SMESIHVPDP
DEG_COP1_1
0.0556
Drug responses associated with GFM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SMESIHVPDP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96RP9
Elongation factor G, mitochondrial
DEG_COP1_1
440:449
SMESIHVPDP
COP1
0.9401
More...