DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SPDPPVPEL
Uniprot ID:
Q96DN6
Source protein:
Methyl-CpG-binding domain protein 6
Source gene:
MBD6
Class:
DEG_COP1_1
Location:
840:848
E3 ligase:
COP1
DEGRON score:
0.5066
ASA_SCORE:
91.5778
COIL:
0.9327
CONS_SCORE:
0.4322
DSS_SCORE:
0.7889
HELIX:
0.0489
FCONS_SCORE:
1.0148
RIG_SCORE:
0.5884
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R857W
TCGA-BR-A4QL
STAD
TCGA
SPDPPVPEL
DEG_COP1_1
0.0833
p.R857W
DO38723
STAD
ICGC
SPDPPVPEL
DEG_COP1_1
0.0833
p.R857L
TCGA-EE-A29L
SKCM
TCGA
SPDPPVPEL
DEG_COP1_1
0.0833
p.R857L
DO37835
SKCM
ICGC
SPDPPVPEL
DEG_COP1_1
0.0833
p.R852S
DO228902
LICA
ICGC
SPDPPVPEL
DEG_COP1_1
0.2222
p.G855W
SIDM00683
Prostate Carcinoma
GDSC
SPDPPVPEL
DEG_COP1_1
0.1389
p.G855W
ACH-000977
lymph_node
CCLE
SPDPPVPEL
DEG_COP1_1
0.1389
p.G839A
SIDM00845
Burkitt's Lymphoma
GDSC
SPDPPVPEL
DEG_COP1_1
0.3056
p.G839A
ACH-000786
Lymphoma
CCLE
SPDPPVPEL
DEG_COP1_1
0.3056
p.P837L
SIDM00560
Gastric Carcinoma
GDSC
SPDPPVPEL
DEG_COP1_1
0.25
p.P837L
ACH-000678
Gastric Cancer
CCLE
SPDPPVPEL
DEG_COP1_1
0.25
p.P837L
MKN7
stomach
COSMIC
SPDPPVPEL
DEG_COP1_1
0.25
Drug responses associated with MBD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SPDPPVPEL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96DN6
Methyl-CpG-binding domain protein 6
DEG_COP1_1
840:848
SPDPPVPEL
COP1
0.5066
More...