DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SPGEEALVPTF
Uniprot ID:
Q96S65
Source protein:
Cysteine/serine-rich nuclear protein 1
Source gene:
CSRNP1
Class:
DEG_COP1_1
Location:
322:332
E3 ligase:
COP1
DEGRON score:
0.9881
ASA_SCORE:
81.2091
COIL:
0.8345
CONS_SCORE:
0.393
DSS_SCORE:
0.7299
HELIX:
0.1211
FCONS_SCORE:
1.0704
RIG_SCORE:
0.6337
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P333Q
DO229025
LICA
ICGC
SPGEEALVPTF
DEG_COP1_1
0.3056
p.G318D
DO218535
BTCA
ICGC
SPGEEALVPTF
DEG_COP1_1
0.2222
p.M339I
ACH-002396
Bone Cancer
CCLE
SPGEEALVPTF
DEG_COP1_1
0.1389
p.M339I
Sarc9371
bone
COSMIC
SPGEEALVPTF
DEG_COP1_1
0.1389
p.E313K
TCGA-EE-A2GB
SKCM
TCGA
SPGEEALVPTF
DEG_COP1_1
0.0833
p.E313K
DO222683
MELA
ICGC
SPGEEALVPTF
DEG_COP1_1
0.0833
p.E313K
DO37417
SKCM
ICGC
SPGEEALVPTF
DEG_COP1_1
0.0833
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Drug responses associated with CSRNP1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of SPGEEALVPTF
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96S65
Cysteine/serine-rich nuclear protein 1
DEG_COP1_1
322:332
SPGEEALVPTF
COP1
0.9881
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