DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SPRSKESVPEF
Uniprot ID:
P16949
Source protein:
Stathmin
Source gene:
STMN1
Class:
DEG_COP1_1
Location:
25:35
E3 ligase:
COP1
DEGRON score:
0.983
ASA_SCORE:
89.7545
COIL:
0.8652
CONS_SCORE:
0.5146
DSS_SCORE:
0.4963
HELIX:
0.0138
FCONS_SCORE:
0.754
RIG_SCORE:
0.6519
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S28P
TCGA-06-5416
GBM
TCGA
SPRSKESVPEF
DEG_COP1_1
0.7863
p.S28P
DO10880
GBM
ICGC
SPRSKESVPEF
DEG_COP1_1
0.7863
p.S31Y
TCGA-AA-A010
COAD
TCGA
SPRSKESVPEF
DEG_COP1_1
0.712
p.S31P
DO35611
PBCA
ICGC
SPRSKESVPEF
DEG_COP1_1
0.6752
p.K29I
TCGA-DD-AADS
LIHC
TCGA
SPRSKESVPEF
DEG_COP1_1
0.642
p.K29I
DO52247
LIHC
ICGC
SPRSKESVPEF
DEG_COP1_1
0.642
p.E30K
DO222395
MELA
ICGC
SPRSKESVPEF
DEG_COP1_1
0.591
p.E30Q
DO46402
OV
ICGC
SPRSKESVPEF
DEG_COP1_1
0.5633
p.L24F
DO48362
BLCA
ICGC
SPRSKESVPEF
DEG_COP1_1
0.3056
p.P36T
SIDM00145
T-Lymphoblastic Leukemia
GDSC
SPRSKESVPEF
DEG_COP1_1
0.3056
p.P36T
ACH-001127
Leukemia
CCLE
SPRSKESVPEF
DEG_COP1_1
0.3056
p.P36T
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
SPRSKESVPEF
DEG_COP1_1
0.3056
p.P39S
TCGA-D3-A2JF
SKCM
TCGA
SPRSKESVPEF
DEG_COP1_1
0.2222
p.P39S
DO38153
SKCM
ICGC
SPRSKESVPEF
DEG_COP1_1
0.2222
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Drug responses associated with STMN1 mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of SPRSKESVPEF
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P16949
Stathmin
DEG_COP1_1
25:35
SPRSKESVPEF
COP1
0.983
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