DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SPTARVGPS
Uniprot ID:
O75151
Source protein:
Lysine-specific demethylase PHF2
Source gene:
PHF2
Class:
DEG_SIAH_1
Location:
905:913
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9833
ASA_SCORE:
73.9
COIL:
0.8994
CONS_SCORE:
0.3287
DSS_SCORE:
0.7127
HELIX:
0.068
FCONS_SCORE:
0.9808
RIG_SCORE:
0.6259
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E923D
TCGA-55-8511
LUAD
TCGA
SPTARVGPS
DEG_SIAH_1
0.0556
p.R922C
TCGA-AA-A01R
COAD
TCGA
SPTARVGPS
DEG_SIAH_1
0.0833
p.R896M
TCGA-BR-4363
STAD
TCGA
SPTARVGPS
DEG_SIAH_1
0.0833
p.P903S
TCGA-EE-A20C
SKCM
TCGA
SPTARVGPS
DEG_SIAH_1
0.2778
p.P903L
TCGA-EE-A20C
SKCM
TCGA
SPTARVGPS
DEG_SIAH_1
0.2778
p.P906Q
TCGA-EE-A2GI
SKCM
TCGA
SPTARVGPS
DEG_SIAH_1
0.7035
p.R919S
SIDM02039
Colorectal Carcinoma
GDSC
SPTARVGPS
DEG_SIAH_1
0.1667
p.A902T
SIDM01721
Non-Cancerous
GDSC
SPTARVGPS
DEG_SIAH_1
0.25
p.A902T
SIDM00191
Kidney Carcinoma
GDSC
SPTARVGPS
DEG_SIAH_1
0.25
Drug responses associated with PHF2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SPTARVGPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75151
Lysine-specific demethylase PHF2
DEG_SIAH_1
905:913
SPTARVGPS
SIAH1,SIAH2,SIAH3
0.9833
More...